Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JYA46_RS00910 Genome accession   NZ_CP070991
Coordinates   144999..145817 (+) Length   272 a.a.
NCBI ID   WP_210994227.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CBS2016-05     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 139999..150817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYA46_RS00875 (JYA46_000175) - 141509..141661 (+) 153 WP_001788502.1 hypothetical protein -
  JYA46_RS00880 (JYA46_000176) - 141732..141842 (+) 111 WP_000139423.1 hypothetical protein -
  JYA46_RS00885 (JYA46_000177) - 141844..142029 (+) 186 WP_001286805.1 hypothetical protein -
  JYA46_RS00890 (JYA46_000178) - 142355..142456 (-) 102 WP_011447034.1 hypothetical protein -
  JYA46_RS00895 (JYA46_000179) - 142783..142944 (+) 162 WP_001005407.1 SE1561 family protein -
  JYA46_RS00900 (JYA46_000180) - 143074..143589 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  JYA46_RS00905 (JYA46_000181) sgtB 143929..144738 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  JYA46_RS00910 (JYA46_000182) recX 144999..145817 (+) 819 WP_210994227.1 recombination regulator RecX Regulator
  JYA46_RS00915 (JYA46_000183) - 145795..146109 (+) 315 WP_000435806.1 YfhH family protein -
  JYA46_RS00920 (JYA46_000184) - 146124..147641 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  JYA46_RS00925 (JYA46_000185) - 147650..148486 (+) 837 WP_210994228.1 hypothetical protein -
  JYA46_RS00930 (JYA46_000186) - 148747..149724 (-) 978 WP_072491836.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32213.01 Da        Isoelectric Point: 5.9211

>NTDB_id=475431 JYA46_RS00910 WP_210994227.1 144999..145817(+) (recX) [Staphylococcus aureus strain CBS2016-05]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKAKEKVMQSLIQKGFEIETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=475431 JYA46_RS00910 WP_210994227.1 144999..145817(+) (recX) [Staphylococcus aureus strain CBS2016-05]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGCTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATAGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989