Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   H7992_RS16850 Genome accession   NZ_CP060287
Coordinates   3439107..3440360 (-) Length   417 a.a.
NCBI ID   WP_187045359.1    Uniprot ID   A0A7G8X2P1
Organism   Sporosarcina sp. resist     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3434107..3445360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7992_RS16830 (H7992_16830) - 3434845..3435117 (-) 273 WP_067211081.1 stage V sporulation protein S -
  H7992_RS16835 (H7992_16835) - 3435204..3436001 (-) 798 WP_067214009.1 TIGR00282 family metallophosphoesterase -
  H7992_RS16840 (H7992_16840) rny 3436066..3437625 (-) 1560 WP_187045358.1 ribonuclease Y -
  H7992_RS16845 (H7992_16845) recA 3437872..3438930 (-) 1059 WP_067211085.1 recombinase RecA Machinery gene
  H7992_RS16850 (H7992_16850) cinA 3439107..3440360 (-) 1254 WP_187045359.1 competence/damage-inducible protein A Machinery gene
  H7992_RS16855 (H7992_16855) pgsA 3440375..3440953 (-) 579 WP_067211090.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  H7992_RS16860 (H7992_16860) - 3441004..3441870 (-) 867 WP_082786632.1 helix-turn-helix domain-containing protein -
  H7992_RS16865 (H7992_16865) - 3441887..3442684 (-) 798 WP_067211096.1 DUF3388 domain-containing protein -
  H7992_RS16870 (H7992_16870) ymfI 3442970..3443704 (-) 735 WP_067211097.1 elongation factor P 5-aminopentanone reductase -
  H7992_RS16875 (H7992_16875) yfmH 3443701..3444999 (-) 1299 WP_067214010.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 417 a.a.        Molecular weight: 45104.86 Da        Isoelectric Point: 5.0268

>NTDB_id=475347 H7992_RS16850 WP_187045359.1 3439107..3440360(-) (cinA) [Sporosarcina sp. resist]
MKAEIIAIGSELLLGQITNTNAKFISLKLAEIGIDVHYQTVVGDNPDRLDEVIEIAMKRADILIFTGGLGPTKDDMTKET
IVKHIGTTLVSDDEALLYIQQYFKRSGRVMTENNKKQALVFKGAKVLANRKGMAPGMAVEKDEVRYILLPGPPHEMEPMF
TDEAIPYLLGVTGKQEVITSRVLKFYGIGEAELEHRIQSILEKQTNPTVAPLATADAVTLRLTAKAKTTDAALKLISPIE
EEIRLLVGDYIYGTDDDTLASKAAELLIRNGWTLAAAESLTAGLFMAELAGEPGISSSLEGGIVVYNEKSKVEQLGIEQS
LLAEYGVVSAECAAALAENVKRTFKSDIGIGLTGAAGPDPHDGKPVGTVWIGITSTDAETETFKLLLSGSRNANRLRAAR
FALYYLIKHLTTKEGQS

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=475347 H7992_RS16850 WP_187045359.1 3439107..3440360(-) (cinA) [Sporosarcina sp. resist]
ATGAAGGCAGAAATTATTGCAATTGGCTCAGAGTTATTACTTGGACAAATTACGAATACGAACGCTAAATTCATTTCGTT
AAAACTCGCAGAAATTGGTATCGATGTTCATTATCAGACGGTCGTGGGCGACAACCCGGATCGTTTGGATGAAGTGATTG
AAATTGCAATGAAACGTGCAGATATTCTAATCTTTACAGGCGGACTTGGACCGACGAAAGATGACATGACAAAAGAAACC
ATCGTGAAACATATCGGTACAACATTAGTCAGCGATGACGAGGCACTTCTTTATATTCAGCAATATTTCAAACGTAGCGG
TAGGGTTATGACGGAGAATAATAAGAAACAGGCACTAGTGTTTAAAGGCGCGAAAGTCTTAGCAAACCGAAAAGGAATGG
CACCCGGAATGGCTGTTGAAAAGGATGAAGTACGCTATATCCTTCTCCCAGGTCCACCGCATGAAATGGAGCCGATGTTT
ACGGATGAGGCGATTCCTTATTTGTTAGGTGTTACTGGCAAACAGGAAGTTATCACATCGCGAGTTCTGAAGTTTTACGG
TATTGGGGAGGCGGAGCTTGAACACCGGATTCAATCTATTTTGGAAAAACAAACGAATCCGACAGTTGCGCCGCTGGCAA
CAGCTGACGCGGTCACATTGCGCCTCACTGCAAAAGCAAAAACGACCGATGCAGCGTTGAAGCTGATTTCGCCAATAGAA
GAGGAGATACGTTTACTAGTTGGAGACTACATCTACGGAACTGATGATGATACATTGGCATCCAAAGCTGCAGAACTTCT
CATTCGAAACGGTTGGACACTAGCTGCTGCGGAAAGTCTGACGGCAGGTCTATTTATGGCAGAACTGGCCGGTGAACCAG
GGATTAGTTCGTCACTAGAAGGTGGCATTGTCGTCTACAATGAGAAATCGAAAGTAGAACAACTTGGTATTGAGCAGTCC
CTACTTGCGGAGTATGGTGTCGTCAGTGCAGAATGCGCGGCTGCCCTTGCGGAAAACGTGAAACGAACGTTCAAATCGGA
TATTGGAATTGGTTTAACAGGTGCGGCTGGCCCAGATCCACATGATGGGAAGCCAGTCGGCACTGTGTGGATTGGTATCA
CTTCTACAGATGCAGAGACAGAGACATTTAAGTTGTTACTATCGGGTTCAAGAAACGCAAACCGTCTCAGAGCAGCAAGA
TTTGCGCTCTATTATCTGATTAAACACCTAACTACAAAAGAAGGCCAAAGTTAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(257-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G8X2P1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

50

98.801

0.494
  cinA Streptococcus pneumoniae TIGR4

44.365

100

0.444
  cinA Streptococcus pneumoniae Rx1

44.365

100

0.444
  cinA Streptococcus pneumoniae R6

44.365

100

0.444
  cinA Streptococcus pneumoniae D39

44.125

100

0.441
  cinA Streptococcus mitis NCTC 12261

43.645

100

0.436
  cinA Streptococcus mitis SK321

43.405

100

0.434
  cinA Streptococcus mutans UA159

41.646

99.041

0.412