Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I653_RS14335 Genome accession   NC_020832
Coordinates   2888119..2888814 (-) Length   231 a.a.
NCBI ID   WP_015483587.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BAB-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2883119..2893814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I653_RS14315 (I653_14540) yttA 2883546..2884292 (+) 747 WP_015483586.1 LMBR1 domain-containing protein -
  I653_RS14320 (I653_14545) bceB 2884329..2886269 (-) 1941 WP_015384426.1 bacitracin ABC transporter permease BceB -
  I653_RS14325 (I653_14550) bceA 2886259..2887020 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  I653_RS14330 (I653_14555) bceS 2887122..2888126 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  I653_RS14335 (I653_14560) braR 2888119..2888814 (-) 696 WP_015483587.1 two-component response regulator BceR Regulator
  I653_RS14340 (I653_14565) ytrF 2888911..2890221 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  I653_RS14345 (I653_14570) ytrE 2890211..2890906 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  I653_RS14350 (I653_14575) ytrD 2890921..2891898 (-) 978 WP_015483588.1 ABC transporter permease YtrD -
  I653_RS14355 (I653_14580) ytrC 2891928..2892914 (-) 987 WP_015483589.1 ABC transporter permease YtrC -
  I653_RS14360 (I653_14585) ytrB 2892908..2893786 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=47518 I653_RS14335 WP_015483587.1 2888119..2888814(-) (braR) [Bacillus subtilis subsp. subtilis str. BAB-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=47518 I653_RS14335 WP_015483587.1 2888119..2888814(-) (braR) [Bacillus subtilis subsp. subtilis str. BAB-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAATCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377