Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | I653_RS12405 | Genome accession | NC_020832 |
| Coordinates | 2487803..2488930 (-) | Length | 375 a.a. |
| NCBI ID | WP_015483467.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis str. BAB-1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2482803..2493930
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I653_RS21045 | - | 2483316..2483689 (+) | 374 | Protein_2487 | sigma-70 family RNA polymerase sigma factor | - |
| I653_RS20595 (I653_12530) | - | 2483737..2483862 (-) | 126 | Protein_2488 | recombinase | - |
| I653_RS19985 (I653_12535) | - | 2483859..2483981 (-) | 123 | WP_015483462.1 | hypothetical protein | - |
| I653_RS12380 (I653_12540) | yrkL | 2484438..2484962 (-) | 525 | WP_015384155.1 | NAD(P)H-dependent oxidoreductase | - |
| I653_RS12385 (I653_12545) | yrkK | 2485209..2485685 (-) | 477 | WP_015483463.1 | HXXEE domain-containing protein | - |
| I653_RS12390 (I653_12550) | - | 2485992..2486411 (+) | 420 | WP_015483464.1 | MarR family transcriptional regulator | - |
| I653_RS12395 (I653_12555) | - | 2486432..2486824 (+) | 393 | WP_015483465.1 | rhodanese-like domain-containing protein | - |
| I653_RS12400 (I653_12560) | - | 2486829..2487254 (+) | 426 | WP_015483466.1 | EVE domain-containing protein | - |
| I653_RS12405 (I653_12565) | rapC | 2487803..2488930 (-) | 1128 | WP_015483467.1 | Rap family tetratricopeptide repeat protein | Regulator |
| I653_RS12410 (I653_12570) | - | 2489116..2491008 (+) | 1893 | WP_015483468.1 | T7SS effector LXG polymorphic toxin | - |
| I653_RS12415 (I653_12575) | cdiI | 2491030..2491389 (+) | 360 | WP_015384160.1 | ribonuclease toxin immunity protein CdiI | - |
| I653_RS12420 (I653_12580) | - | 2491442..2491746 (+) | 305 | Protein_2498 | tRNA-Val4 | - |
| I653_RS21480 (I653_12585) | - | 2492083..2492268 (+) | 186 | WP_015384162.1 | SMI1/KNR4 family protein | - |
| I653_RS12430 (I653_12590) | - | 2492514..2493236 (-) | 723 | WP_015384163.1 | NPP1 family protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44180.37 Da Isoelectric Point: 5.6714
>NTDB_id=47501 I653_RS12405 WP_015483467.1 2487803..2488930(-) (rapC) [Bacillus subtilis subsp. subtilis str. BAB-1]
MNLVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNQTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF
MNLVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNQTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF
Nucleotide
Download Length: 1128 bp
>NTDB_id=47501 I653_RS12405 WP_015483467.1 2487803..2488930(-) (rapC) [Bacillus subtilis subsp. subtilis str. BAB-1]
GTGAATCTGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTATTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCAGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATCAAACAATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA
GTGAATCTGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTATTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCAGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATCAAACAATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.415 |
100 |
0.445 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.683 |
100 |
0.4 |