Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   JOW61_RS16275 Genome accession   NZ_CP070844
Coordinates   3031098..3031961 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. natto strain BN0     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3026098..3036961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOW61_RS16240 (JOW61_16095) mrpE 3026266..3026742 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JOW61_RS16245 (JOW61_16100) mrpF 3026742..3027026 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JOW61_RS16250 (JOW61_16105) mnhG 3027010..3027384 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  JOW61_RS16255 (JOW61_16110) yuxO 3027423..3027803 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  JOW61_RS16260 (JOW61_16115) comA 3027822..3028466 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JOW61_RS16265 (JOW61_16120) comP 3028547..3030859 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  JOW61_RS16270 (JOW61_16125) comX 3030875..3031096 (-) 222 WP_014480704.1 competence pheromone ComX -
  JOW61_RS16275 (JOW61_16130) comQ 3031098..3031961 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  JOW61_RS16280 (JOW61_16135) degQ 3032146..3032286 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JOW61_RS16285 (JOW61_16140) - 3032508..3032633 (+) 126 WP_003228793.1 hypothetical protein -
  JOW61_RS16290 (JOW61_16145) - 3032747..3033115 (+) 369 WP_014477834.1 hypothetical protein -
  JOW61_RS16295 (JOW61_16150) pdeH 3033091..3034320 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  JOW61_RS16300 (JOW61_16155) pncB 3034456..3035928 (-) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  JOW61_RS16305 (JOW61_16160) pncA 3035944..3036495 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=474736 JOW61_RS16275 WP_014480705.1 3031098..3031961(-) (comQ) [Bacillus subtilis subsp. natto strain BN0]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=474736 JOW61_RS16275 WP_014480705.1 3031098..3031961(-) (comQ) [Bacillus subtilis subsp. natto strain BN0]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439