Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H7F27_RS21015 Genome accession   NZ_CP060193
Coordinates   3752578..3752718 (-) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus sp. PAMC26543     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3747578..3757718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS21010 srfAB 3749942..3752632 (-) 2691 Protein_3739 surfactin non-ribosomal peptide synthetase SrfAB -
  H7F27_RS21015 comS 3752578..3752718 (-) 141 WP_223203921.1 competence protein ComS Regulator
  H7F27_RS21020 srfAB 3752810..3755854 (-) 3045 Protein_3741 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=474546 H7F27_RS21015 WP_223203921.1 3752578..3752718(-) (comS) [Bacillus sp. PAMC26543]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=474546 H7F27_RS21015 WP_223203921.1 3752578..3752718(-) (comS) [Bacillus sp. PAMC26543]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913