Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   H7F27_RS14825 Genome accession   NZ_CP060193
Coordinates   2933121..2934074 (-) Length   317 a.a.
NCBI ID   WP_024120903.1    Uniprot ID   -
Organism   Bacillus sp. PAMC26543     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2928121..2939074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS14795 (H7F27_14795) appD 2928248..2929234 (-) 987 WP_185848081.1 oligopeptide ABC transporter ATP-binding protein AppD -
  H7F27_RS14800 (H7F27_14800) - 2929425..2930210 (-) 786 WP_185848082.1 DUF2268 domain-containing protein -
  H7F27_RS14805 (H7F27_14805) fabF 2930290..2931528 (-) 1239 WP_185848083.1 beta-ketoacyl-ACP synthase II -
  H7F27_RS14810 (H7F27_14810) fabH 2931551..2932489 (-) 939 WP_185848084.1 beta-ketoacyl-ACP synthase III -
  H7F27_RS14815 (H7F27_14815) - 2932655..2932885 (+) 231 WP_081638273.1 hypothetical protein -
  H7F27_RS14820 (H7F27_14820) comZ 2932915..2933106 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  H7F27_RS14825 (H7F27_14825) med 2933121..2934074 (-) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  H7F27_RS14830 (H7F27_14830) - 2934165..2934728 (-) 564 WP_185848085.1 hypothetical protein -
  H7F27_RS14835 (H7F27_14835) - 2934811..2935548 (-) 738 WP_095713629.1 hypothetical protein -
  H7F27_RS14840 (H7F27_14840) - 2935807..2935992 (+) 186 WP_010333727.1 YjzD family protein -
  H7F27_RS14845 (H7F27_14845) - 2936038..2936217 (-) 180 WP_003239319.1 YjzC family protein -
  H7F27_RS14850 (H7F27_14850) argF 2936302..2937259 (-) 958 Protein_2944 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35285.95 Da        Isoelectric Point: 4.9707

>NTDB_id=474527 H7F27_RS14825 WP_024120903.1 2933121..2934074(-) (med) [Bacillus sp. PAMC26543]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=474527 H7F27_RS14825 WP_024120903.1 2933121..2934074(-) (med) [Bacillus sp. PAMC26543]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTAAATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTCAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAATGCAAAAGCAAAAGCGGACAATGTCACAAGCGTTCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTGGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAAAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
GACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTGGACA
AAGCCTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

93.375

100

0.934