Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   H7F27_RS13360 Genome accession   NZ_CP060193
Coordinates   2668401..2668865 (+) Length   154 a.a.
NCBI ID   WP_024121211.1    Uniprot ID   A0A9Q6A820
Organism   Bacillus sp. PAMC26543     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2663401..2673865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS13340 (H7F27_13340) fadH 2664586..2665350 (-) 765 WP_127695339.1 2,4-dienoyl-CoA reductase -
  H7F27_RS13345 (H7F27_13345) - 2665495..2666355 (+) 861 WP_185848008.1 metallophosphoesterase -
  H7F27_RS13350 (H7F27_13350) - 2666413..2666907 (+) 495 WP_081638296.1 L,D-transpeptidase family protein -
  H7F27_RS13355 (H7F27_13355) - 2666983..2668275 (+) 1293 WP_024121212.1 MFS transporter -
  H7F27_RS13360 (H7F27_13360) kre 2668401..2668865 (+) 465 WP_024121211.1 YkyB family protein Regulator
  H7F27_RS13365 (H7F27_13365) cheV 2668907..2669818 (-) 912 WP_101860663.1 chemotaxis protein CheV -
  H7F27_RS13370 (H7F27_13370) - 2670025..2670186 (+) 162 WP_003238943.1 hypothetical protein -
  H7F27_RS13375 (H7F27_13375) - 2670388..2671571 (+) 1184 Protein_2646 aminotransferase A -
  H7F27_RS13380 (H7F27_13380) kinA 2671581..2673401 (-) 1821 WP_101860661.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17884.73 Da        Isoelectric Point: 10.4658

>NTDB_id=474518 H7F27_RS13360 WP_024121211.1 2668401..2668865(+) (kre) [Bacillus sp. PAMC26543]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=474518 H7F27_RS13360 WP_024121211.1 2668401..2668865(+) (kre) [Bacillus sp. PAMC26543]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACCGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.052

100

0.981