Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   H7F27_RS13255 Genome accession   NZ_CP060193
Coordinates   2651690..2652265 (-) Length   191 a.a.
NCBI ID   WP_024121230.1    Uniprot ID   A0A9Q4HNH0
Organism   Bacillus sp. PAMC26543     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2646690..2657265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS13230 (H7F27_13230) mobB 2647088..2647609 (-) 522 WP_101860671.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  H7F27_RS13235 (H7F27_13235) glp 2647570..2648862 (-) 1293 WP_024121234.1 gephyrin-like molybdotransferase Glp -
  H7F27_RS13240 (H7F27_13240) - 2648880..2649899 (-) 1020 WP_185848002.1 MoeB/ThiF family adenylyltransferase -
  H7F27_RS13245 (H7F27_13245) - 2649951..2650550 (-) 600 WP_185848003.1 molybdenum cofactor guanylyltransferase -
  H7F27_RS13250 (H7F27_13250) - 2650683..2651648 (+) 966 WP_024121231.1 hypothetical protein -
  H7F27_RS13255 (H7F27_13255) rok 2651690..2652265 (-) 576 WP_024121230.1 transcriptional regulator Rok Regulator
  H7F27_RS13260 (H7F27_13260) ykuV 2652717..2653175 (-) 459 WP_024121229.1 thiol-disulfide oxidoreductase YkuV -
  H7F27_RS13265 (H7F27_13265) ahpA 2653257..2653799 (-) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  H7F27_RS13270 (H7F27_13270) - 2654044..2654847 (+) 804 WP_185848004.1 mechanosensitive ion channel family protein -
  H7F27_RS13275 (H7F27_13275) - 2654882..2655127 (-) 246 WP_010334064.1 YkuS family protein -
  H7F27_RS13280 (H7F27_13280) - 2655188..2656312 (-) 1125 WP_185848005.1 N-acetyldiaminopimelate deacetylase -
  H7F27_RS13285 (H7F27_13285) dapD 2656383..2657093 (-) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21761.69 Da        Isoelectric Point: 9.8783

>NTDB_id=474517 H7F27_RS13255 WP_024121230.1 2651690..2652265(-) (rok) [Bacillus sp. PAMC26543]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSTSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQSISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=474517 H7F27_RS13255 WP_024121230.1 2651690..2652265(-) (rok) [Bacillus sp. PAMC26543]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTAAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCACTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACTAGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAGAGCTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.764

100

0.948