Detailed information NTG0474511

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: H7F27_RS10705
• Genome accession: NZ_CP060193
• Coordinates: 2058929..2060059 (-)
• Length: 376 a.a.
• NCBI ID: WP_024121691.1
• Uniprot ID: A0A9Q6A4J6
• Organism: Bacillus sp. PAMC26543
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2053929..2065059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F27_RS20850	-	2053999..2054259 (+)	261	WP_251191693.1	tyrosine-type recombinase/integrase	-
H7F27_RS10690 (H7F27_10690)	ppsA	2055512..2058116 (+)	2605	Protein_2100	phosphoenolpyruvate synthase	-
H7F27_RS10695 (H7F27_10695)	-	2058410..2058756 (+)	347	Protein_2101	UV damage repair protein UvrX	-
H7F27_RS10700 (H7F27_10700)	-	2058796..2058939 (-)	144	WP_024121692.1	hypothetical protein	-
H7F27_RS10705 (H7F27_10705)	rapC	2058929..2060059 (-)	1131	WP_024121691.1	tetratricopeptide repeat protein	Regulator
H7F27_RS21130	-	2060193..2060237 (-)	45	WP_372588338.1	hypothetical protein	-
H7F27_RS10715 (H7F27_10715)	-	2060562..2060822 (-)	261	WP_081638323.1	hypothetical protein	-
H7F27_RS10725 (H7F27_10725)	-	2061570..2061734 (+)	165	WP_024121689.1	AAA family ATPase	-
H7F27_RS10730 (H7F27_10730)	-	2062084..2062352 (+)	269	Protein_2107	hypothetical protein	-
H7F27_RS10735 (H7F27_10735)	-	2062460..2062867 (+)	408	WP_024121686.1	UPF0715 family protein	-
H7F27_RS10740 (H7F27_10740)	-	2062950..2063483 (+)	534	WP_185847878.1	GNAT family N-acetyltransferase	-
H7F27_RS10745 (H7F27_10745)	-	2063839..2064351 (+)	513	WP_024121684.1	GNAT family N-acetyltransferase	-
H7F27_RS20855	-	2064444..2064683 (-)	240	WP_249746143.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44425.16 Da
• Isoelectric Point: 5.5295

>NTDB_id=474511 H7F27_RS10705 WP_024121691.1 2058929..2060059(-) (rapC) [Bacillus sp. PAMC26543]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKEYIRAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAETALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIEQAVSLYETDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFQT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=474511 H7F27_RS10705 WP_024121691.1 2058929..2060059(-) (rapC) [Bacillus sp. PAMC26543]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGCCAAACAAAACTGAAAGGTGTACTAGAATACTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGAATATATAAGAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTTGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAACAGCCCTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCCCATCTTCAGAGAGCCTTAAAAGACTCAAAAGCCATAA
ACAAGCACAAACTAATTGGGGCATCTTTATATAATTTGGGGAACTGTTATTATAAAATGAAAGAGTATGACAAAGCTGCT
GAATATATTGAGCAAGCAGTCTCATTGTACGAAACCGATAAAAGTGATCTTCTCCCTCACACGTTATTTACGCTTACACA
AATTTACTTTAAAATGAAAGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCGAGAAAGCGCAAGCCATAAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTTCAAACT
TTTTCTGTACTTAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAAGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	51.064	100	0.511
rapF	Bacillus subtilis subsp. subtilis str. 168	45.383	100	0.457