Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   H7F27_RS08910 Genome accession   NZ_CP060193
Coordinates   1746318..1747121 (+) Length   267 a.a.
NCBI ID   WP_010334880.1    Uniprot ID   A0A9Q4HNW6
Organism   Bacillus sp. PAMC26543     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1741318..1752121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS08890 (H7F27_08890) - 1741433..1742278 (+) 846 WP_024122006.1 TlyA family RNA methyltransferase -
  H7F27_RS08895 (H7F27_08895) argR 1742375..1742824 (+) 450 WP_010334883.1 arginine repressor ArgR -
  H7F27_RS08900 (H7F27_08900) recN 1742860..1744590 (+) 1731 WP_101861022.1 DNA repair protein RecN Machinery gene
  H7F27_RS08905 (H7F27_08905) spoIVB 1744765..1746042 (+) 1278 WP_101861021.1 SpoIVB peptidase -
  H7F27_RS08910 (H7F27_08910) spo0A 1746318..1747121 (+) 804 WP_010334880.1 sporulation transcription factor Spo0A Regulator
  H7F27_RS08915 (H7F27_08915) - 1747685..1748803 (-) 1119 WP_103672295.1 NADH-dependent flavin oxidoreductase -
  H7F27_RS08920 (H7F27_08920) - 1748876..1749010 (-) 135 WP_024122000.1 hypothetical protein -
  H7F27_RS08925 (H7F27_08925) - 1749339..1749629 (+) 291 WP_024121999.1 hypothetical protein -
  H7F27_RS08930 (H7F27_08930) - 1749652..1750272 (+) 621 WP_095713255.1 N-acetylmuramoyl-L-alanine amidase -
  H7F27_RS08935 (H7F27_08935) - 1750362..1751105 (+) 744 WP_185848840.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29719.20 Da        Isoelectric Point: 6.3913

>NTDB_id=474509 H7F27_RS08910 WP_010334880.1 1746318..1747121(+) (spo0A) [Bacillus sp. PAMC26543]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKRKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=474509 H7F27_RS08910 WP_010334880.1 1746318..1747121(+) (spo0A) [Bacillus sp. PAMC26543]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGAGTTGCGTATAACGGACAGGAATGCCTGTCGCTATTTAAAGAAAAAGATCCTGATGTGCTCG
TCTTGGATATTATTATGCCTCATTTGGACGGACTTGCTGTTTTAGAGCGACTGAGAGAATCCGATCTGAAAAAACAGCCA
AACGTCATCATGCTGACAGCCTTCGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGAGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATTCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGCGCGC
CGTCATCACAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAAAGGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCTGCACATATTAAAGGCTATCTCTATCTGCGTGAAGCGATCTCAATGGTGTACAACGACAT
CGAACTGCTCGGCAGTATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCTAGCCGTGTAGAAA
GAGCGATCCGCCACGCGATTGAAGTGGCATGGAGCAGAGGGAATATTGATTCCATTTCCTCATTGTTCGGCTATACAGTC
AGCATGACGAAGGCAAAACCTACAAATTCAGAGTTCATTGCGATGGTTGCAGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996