Detailed information NTG0474483

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JWY35_RS13355
• Genome accession: NZ_CP070485
• Coordinates: 2475036..2476163 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JNFE1126
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2470036..2481163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY35_RS13330	-	2470083..2470295 (-)	213	Protein_2580	recombinase family protein	-
JWY35_RS13335 (JWY35_13225)	fumC	2470514..2471902 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
JWY35_RS13340 (JWY35_13230)	-	2472069..2472959 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
JWY35_RS13345 (JWY35_13235)	-	2473901..2474296 (+)	396	WP_014480327.1	VOC family protein	-
JWY35_RS13355 (JWY35_13240)	rapC	2475036..2476163 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
JWY35_RS22620	-	2476345..2477178 (+)	834	Protein_2585	ribonuclease YeeF family protein	-
JWY35_RS22625	-	2477564..2478271 (+)	708	WP_014480330.1	hypothetical protein	-
JWY35_RS13370 (JWY35_13250)	-	2478285..2478572 (+)	288	WP_014480331.1	hypothetical protein	-
JWY35_RS13375 (JWY35_13255)	-	2478975..2479415 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
JWY35_RS13380 (JWY35_13260)	-	2479514..2479966 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
JWY35_RS13385 (JWY35_13265)	cdiI	2480063..2480422 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
JWY35_RS13390 (JWY35_13270)	-	2480527..2481006 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=474483 JWY35_RS13355 WP_014480328.1 2475036..2476163(-) (rapC) [Bacillus subtilis strain JNFE1126]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=474483 JWY35_RS13355 WP_014480328.1 2475036..2476163(-) (rapC) [Bacillus subtilis strain JNFE1126]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397