NTDB

Overview

Name	comGA	Type	Machinery gene
Locus tag	H7F26_RS19470	Genome accession	NZ_CP060192
Coordinates	3769968..3771032 (-)	Length	354 a.a.
NCBI ID	WP_003183477.1	Uniprot ID	Q8VQ73
Organism	Bacillus sp. PAMC28748
Function	dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3764968..3776032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F26_RS19425 (H7F26_19425)	tapA	3765468..3766196 (-)	729	WP_003183451.1	amyloid fiber anchoring/assembly protein TapA	-
H7F26_RS19430 (H7F26_19430)	-	3766473..3766793 (+)	321	WP_003183454.1	YqzG/YhdC family protein	-
H7F26_RS19435 (H7F26_19435)	-	3766817..3766999 (-)	183	WP_003183456.1	YqzE family protein	-
H7F26_RS19440 (H7F26_19440)	comGG	3767088..3767453 (-)	366	WP_003183459.1	competence type IV pilus minor pilin ComGG	-
H7F26_RS19445 (H7F26_19445)	comGF	3767466..3767954 (-)	489	WP_011201694.1	competence type IV pilus minor pilin ComGF	-
H7F26_RS19450 (H7F26_19450)	comGE	3767863..3768210 (-)	348	WP_009327907.1	competence type IV pilus minor pilin ComGE	-
H7F26_RS19455 (H7F26_19455)	comGD	3768194..3768631 (-)	438	WP_009327905.1	competence type IV pilus minor pilin ComGD	-
H7F26_RS19460 (H7F26_19460)	comGC	3768637..3768930 (-)	294	WP_003183466.1	competence type IV pilus major pilin ComGC	Machinery gene
H7F26_RS19465 (H7F26_19465)	comGB	3768944..3769978 (-)	1035	WP_011198115.1	competence type IV pilus assembly protein ComGB	Machinery gene
H7F26_RS19470 (H7F26_19470)	comGA	3769968..3771032 (-)	1065	WP_003183477.1	competence type IV pilus ATPase ComGA	Machinery gene
H7F26_RS19475 (H7F26_19475)	-	3771189..3772028 (-)	840	WP_003183480.1	STAS domain-containing protein	-
H7F26_RS19485 (H7F26_19485)	-	3772270..3772647 (-)	378	WP_003183482.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
H7F26_RS19490 (H7F26_19490)	-	3772856..3773101 (+)	246	WP_003183483.1	DUF2626 domain-containing protein	-
H7F26_RS19495 (H7F26_19495)	-	3773139..3773777 (-)	639	WP_003183485.1	MBL fold metallo-hydrolase	-
H7F26_RS19500 (H7F26_19500)	-	3773933..3774106 (+)	174	WP_003183486.1	DUF2759 domain-containing protein	-
H7F26_RS19505 (H7F26_19505)	-	3774167..3774481 (-)	315	WP_003183487.1	MTH1187 family thiamine-binding protein	-
H7F26_RS19510 (H7F26_19510)	-	3774497..3775606 (-)	1110	WP_003183488.1	hypothetical protein	-

Sequence

Protein

Download Length: 354 a.a. Molecular weight: 39727.31 Da Isoelectric Point: 9.1029

                                >NTDB_id=474457 H7F26_RS19470 WP_003183477.1 3769968..3771032(-) (comGA) [Bacillus sp. PAMC28748]

MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDGLTRNECSRLISHFKFLSSMDIGERRLPQSGALT

LYINREPVHLRMSTLPTIHDESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLMLFTGPTGSGKTTTLYSLIDY

AKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMH

AKNAKGAIYRLLELGVDMTEIEQTLVAVSAQRLVDIVCPFCGDSCTLYCRLSRPVRRASVFELLYGKSLNLCIEEAKGRC

GGIKTDTLKMLIRKGIALGYLPSKTYERWIGHED

Nucleotide

Download Length: 1065 bp

                                >NTDB_id=474457 H7F26_RS19470 WP_003183477.1 3769968..3771032(-) (comGA) [Bacillus sp. PAMC28748]

TTGTACACGATCGAATCATTAAGCGGAAGATTAATTGACGAGGCATATAGAATGAAGGCGTCAGACATTCATATTGTTCC

CGGTGAAAAAGAGGCGGTGGTACGCTTCAGGATTGATGACGAACTGTTTCAAAAAGACGGATTAACGAGAAATGAGTGCT

CTAGACTCATTTCTCACTTTAAATTTCTTTCTTCGATGGACATTGGCGAGAGACGGCTGCCGCAAAGCGGGGCTTTAACT

CTTTATATCAACCGTGAGCCCGTTCATTTAAGGATGTCCACTCTGCCCACCATCCATGATGAAAGCTTGGTCATCAGGCT

TCTTCCCAAGATGAGCAGCAAGCCGCTCACAAAGCTCTCATTGTTCCCGAGTGCAACATTCAAGCTGCTGTCTTTTCTGA

AGCATTCCCACGGATTAATGCTTTTCACCGGCCCGACAGGCTCGGGAAAAACGACAACACTCTATTCTTTAATTGACTAC

GCCAAGCGGCATTTTAAGCGAAATATCATTACGTTGGAAGACCCGGTCGAATCAAGAAGCGAAAACATTTTGCAAGTACA

AGTGAACGAAAAAGCGGGCATGACTTATTCTGCGGGGTTGAAGGCGGTGCTGCGCCACGATCCGGACATGATCATCCTAG

GGGAAATTCGCGATGCCGAAACAGCCCAAATCGCAGTCAGGGCAGCTTTGACGGGACACCTTGTTCTATCGAGCATGCAT

GCGAAAAATGCTAAAGGTGCGATATACAGGCTGCTCGAGCTCGGCGTTGATATGACAGAAATTGAACAAACATTGGTCGC

AGTCAGCGCCCAGCGTCTTGTCGATATCGTCTGTCCGTTTTGCGGCGACAGCTGCACTTTGTATTGCAGATTGTCGAGAC

CAGTTAGAAGAGCAAGCGTCTTTGAACTTTTGTACGGAAAAAGCCTTAATCTCTGCATCGAAGAAGCAAAAGGCAGATGC

GGTGGCATCAAAACAGACACCTTAAAAATGCTGATCCGCAAGGGAATAGCACTCGGATATCTGCCGTCGAAAACTTATGA

ACGCTGGATAGGCCATGAAGATTAA

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(11-275)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	Q8VQ73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comGA	Bacillus subtilis subsp. subtilis str. 168	66.949	100	0.669

Detailed information NTG0474457