Detailed information NTG0474405

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H7F26_RS03380
• Genome accession: NZ_CP060192
• Coordinates: 628230..629387 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC28748
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 623230..634387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F26_RS03350 (H7F26_03350)	-	623474..623893 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
H7F26_RS03355 (H7F26_03355)	comFC	623952..624686 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
H7F26_RS03360 (H7F26_03360)	-	624643..624927 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
H7F26_RS03365 (H7F26_03365)	comFA	624982..626376 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
H7F26_RS03370 (H7F26_03370)	-	626497..627339 (-)	843	WP_003185726.1	DegV family protein	-
H7F26_RS03375 (H7F26_03375)	degU	627459..628148 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
H7F26_RS03380 (H7F26_03380)	degS	628230..629387 (-)	1158	WP_003185733.1	histidine kinase	Regulator
H7F26_RS03385 (H7F26_03385)	-	629601..630239 (+)	639	WP_003185736.1	YigZ family protein	-
H7F26_RS03390 (H7F26_03390)	-	630254..631330 (+)	1077	WP_003185737.1	LCP family protein	-
H7F26_RS03395 (H7F26_03395)	-	631415..631789 (-)	375	WP_003185738.1	hypothetical protein	-
H7F26_RS03400 (H7F26_03400)	-	631909..632973 (-)	1065	WP_003185739.1	glycosyltransferase family 4 protein	-
H7F26_RS03405 (H7F26_03405)	tuaH	633104..634285 (-)	1182	WP_011198354.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=474405 H7F26_RS03380 WP_003185733.1 628230..629387(-) (degS) [Bacillus sp. PAMC28748]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=474405 H7F26_RS03380 WP_003185733.1 628230..629387(-) (degS) [Bacillus sp. PAMC28748]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894