Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H7F25_RS03515 Genome accession   NZ_CP060191
Coordinates   767608..768558 (+) Length   316 a.a.
NCBI ID   WP_024426541.1    Uniprot ID   -
Organism   Bacillus sp. PAMC28571     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 762608..773558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F25_RS03490 (H7F25_03490) comK 762958..763536 (+) 579 WP_024425481.1 competence protein ComK Regulator
  H7F25_RS03495 (H7F25_03495) - 763836..764318 (+) 483 WP_024425482.1 hypothetical protein -
  H7F25_RS03500 (H7F25_03500) - 764349..765788 (-) 1440 WP_044335813.1 PLP-dependent aminotransferase family protein -
  H7F25_RS03505 (H7F25_03505) - 765934..767103 (+) 1170 WP_185854216.1 MFS transporter -
  H7F25_RS03510 (H7F25_03510) - 767168..767446 (+) 279 WP_185854523.1 barstar family protein -
  H7F25_RS03515 (H7F25_03515) ceuB 767608..768558 (+) 951 WP_024426541.1 ABC transporter permease Machinery gene
  H7F25_RS03520 (H7F25_03520) - 768551..769501 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  H7F25_RS03525 (H7F25_03525) - 769492..770250 (+) 759 WP_185854217.1 ABC transporter ATP-binding protein -
  H7F25_RS03530 (H7F25_03530) - 770272..771216 (+) 945 WP_185854218.1 siderophore ABC transporter substrate-binding protein -
  H7F25_RS03535 (H7F25_03535) - 771354..772307 (+) 954 WP_185854219.1 LCP family protein -
  H7F25_RS03540 (H7F25_03540) - 772379..772741 (-) 363 WP_185854220.1 hypothetical protein -
  H7F25_RS03545 (H7F25_03545) - 772898..773515 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34960.36 Da        Isoelectric Point: 9.7476

>NTDB_id=474340 H7F25_RS03515 WP_024426541.1 767608..768558(+) (ceuB) [Bacillus sp. PAMC28571]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=474340 H7F25_RS03515 WP_024426541.1 767608..768558(+) (ceuB) [Bacillus sp. PAMC28571]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATT
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGGTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.163

95.253

0.487