Detailed information NTG0473757

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JTF63_RS21135
• Genome accession: NZ_CP070232
• Coordinates: 4435534..4436559 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 10R
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4430534..4441559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JTF63_RS21115 (JTF63_21115)	metJ	4431595..4431912 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
JTF63_RS21120 (JTF63_21120)	yiiX	4432096..4432704 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
JTF63_RS21125 (JTF63_21125)	rpmE	4432765..4432977 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JTF63_RS21130 (JTF63_21130)	priA	4433180..4435378 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
JTF63_RS21135 (JTF63_21135)	cytR	4435534..4436559 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JTF63_RS21140 (JTF63_21140)	ftsN	4436651..4437610 (+)	960	WP_000068828.1	cell division protein FtsN	-
JTF63_RS21145 (JTF63_21145)	hslV	4437703..4438233 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JTF63_RS21150 (JTF63_21150)	hslU	4438243..4439574 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
JTF63_RS21155 (JTF63_21155)	menA	4439641..4440567 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JTF63_RS21160 (JTF63_21160)	rraA	4440660..4441145 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JTF63_RS21165 (JTF63_21165)	zapB	4441230..4441475 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=473757 JTF63_RS21135 WP_000644904.1 4435534..4436559(+) (cytR) [Escherichia coli strain 10R]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=473757 JTF63_RS21135 WP_000644904.1 4435534..4436559(+) (cytR) [Escherichia coli strain 10R]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628