Detailed information NTG0473550

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H6S61_RS07465
• Genome accession: NZ_CP060047
• Coordinates: 1484994..1486001 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 2497-87
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1479994..1491001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H6S61_RS07445 (H6S61_07445)	metJ	1480100..1480417 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
H6S61_RS07450 (H6S61_07450)	-	1480504..1481781 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
H6S61_RS07455 (H6S61_07455)	rpmE	1482059..1482280 (-)	222	WP_011151292.1	50S ribosomal protein L31	-
H6S61_RS07460 (H6S61_07460)	priA	1482561..1484765 (+)	2205	WP_185892290.1	primosomal protein N'	-
H6S61_RS07465 (H6S61_07465)	cytR	1484994..1486001 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
H6S61_RS07470 (H6S61_07470)	-	1486109..1486666 (+)	558	WP_017419640.1	SPOR domain-containing protein	-
H6S61_RS07475 (H6S61_07475)	hslV	1486816..1487370 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
H6S61_RS07480 (H6S61_07480)	hslU	1487398..1488729 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
H6S61_RS07485 (H6S61_07485)	-	1488894..1489811 (+)	918	WP_185892046.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H6S61_RS07490 (H6S61_07490)	rraA	1489887..1490399 (+)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
H6S61_RS07495 (H6S61_07495)	zapB	1490621..1490863 (+)	243	WP_017789752.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=473550 H6S61_RS07465 WP_011079334.1 1484994..1486001(+) (cytR) [Vibrio vulnificus strain 2497-87]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=473550 H6S61_RS07465 WP_011079334.1 1484994..1486001(+) (cytR) [Vibrio vulnificus strain 2497-87]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCCTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCTGGCATCACAATGAACCCACAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCC
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAAGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGGCACGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCACCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875