Detailed information NTG0473530

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: H6S61_RS05865
• Genome accession: NZ_CP060047
• Coordinates: 1144391..1147780 (+)
• Length: 1129 a.a.
• NCBI ID: WP_185891851.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 2497-87
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1139391..1152780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H6S61_RS05845 (H6S61_05845)	erpA	1139790..1140131 (-)	342	WP_011079598.1	iron-sulfur cluster insertion protein ErpA	-
H6S61_RS05850 (H6S61_05850)	hemL	1140418..1141713 (+)	1296	WP_185891849.1	glutamate-1-semialdehyde 2,1-aminomutase	-
H6S61_RS05855 (H6S61_05855)	-	1141963..1143048 (+)	1086	WP_013571166.1	AI-2E family transporter	-
H6S61_RS05860 (H6S61_05860)	rsmC	1143122..1144144 (+)	1023	WP_039468599.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
H6S61_RS05865 (H6S61_05865)	chiS	1144391..1147780 (+)	3390	WP_185891851.1	response regulator	Regulator
H6S61_RS05870 (H6S61_05870)	-	1148722..1150395 (+)	1674	WP_045618650.1	ABC transporter substrate-binding protein	-
H6S61_RS05875 (H6S61_05875)	-	1150564..1151550 (+)	987	WP_011079592.1	ABC transporter permease	-
H6S61_RS05880 (H6S61_05880)	-	1151553..1152578 (+)	1026	WP_011079591.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127492.50 Da
• Isoelectric Point: 5.8924

>NTDB_id=473530 H6S61_RS05865 WP_185891851.1 1144391..1147780(+) (chiS) [Vibrio vulnificus strain 2497-87]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVLTASDGPETLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=473530 H6S61_RS05865 WP_185891851.1 1144391..1147780(+) (chiS) [Vibrio vulnificus strain 2497-87]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAAAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAGCAGCAACAGATCCTAGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TAGAGAAAACGCTCAGCAGCGCTATATTCAGGGATCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
ATGTCGGTAGTGAACGTTACCGTTTGCTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGATCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAGGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTCCGTCAATTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGAGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCGAACAATGGCATCACTAAACTGATTGCAGACATCAA
TAAAGATGCGGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACTATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTCACGGATGTCGGGACTTATATCAACAGCAGCGGAGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCCATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAACGCAAAGACGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAACGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCGACGACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATCATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTTGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAGT
CCGCCGTCAATTTGGCCAGTGCAACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCCGGTCTGGGACTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCCATGGTTGGTACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTTCTACGCATCGAAGGGTA
CCGAGTGCTAACGGCCTCAGATGGCCCAGAAACACTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGTATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAGTTGCCTATTATC
ATGCTAACAGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATCAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTAGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCAAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAATCGGCCCCAGAAGCCATTATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGATCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATTGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGACATCCTTAAATTACCAGAAGGG
TCTGGCCTTGATGCCATGTTTATCTTCAATGTCGGGGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAGTTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACAAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-926)

• Response regulator receiver domain (Response_reg) (726-837)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.325	100	0.773