Detailed information NTG0473515

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SY91_RS00660
• Genome accession: NZ_CP060039
• Coordinates: 137557..138714 (+)
• Length: 385 a.a.
• NCBI ID: WP_124477317.1
• Uniprot ID: -
• Organism: Burkholderia cenocepacia strain PS27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 132557..143714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SY91_RS00630 (SY91_00126)	-	133192..133797 (+)	606	WP_011546248.1	50S ribosomal protein L25/general stress protein Ctc	-
SY91_RS00635 (SY91_00127)	pth	133918..134517 (+)	600	WP_185921003.1	aminoacyl-tRNA hydrolase	-
SY91_RS00640 (SY91_00128)	hisC	134634..135701 (+)	1068	WP_185921004.1	histidinol-phosphate transaminase	-
SY91_RS00645 (SY91_00129)	-	135792..136058 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
SY91_RS00650 (SY91_00130)	coaD	136117..136614 (-)	498	WP_006477773.1	pantetheine-phosphate adenylyltransferase	-
SY91_RS00655 (SY91_00131)	rsmD	136726..137340 (-)	615	WP_012329248.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SY91_RS00660 (SY91_00132)	pilA	137557..138714 (+)	1158	WP_124477317.1	signal recognition particle-docking protein FtsY	Machinery gene
SY91_RS00665 (SY91_00133)	maiA	138810..139454 (-)	645	WP_124477318.1	maleylacetoacetate isomerase	-
SY91_RS00670 (SY91_00134)	ybiB	139634..140608 (+)	975	WP_011546254.1	DNA-binding protein YbiB	-
SY91_RS00675 (SY91_00135)	leuA	140986..142632 (+)	1647	WP_185921005.1	2-isopropylmalate synthase	-
SY91_RS00680 (SY91_00136)	-	142776..143159 (-)	384	WP_006477767.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 41017.90 Da
• Isoelectric Point: 4.6872

>NTDB_id=473515 SY91_RS00660 WP_124477317.1 137557..138714(+) (pilA) [Burkholderia cenocepacia strain PS27]
MFSFFKRFKKTQEPDPAESQSADAQQTDEAAEAAPVLDAPPAADVPQASAQPAAPAVVMTVTPTNDGRDEVVETVEIVPP
PLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQQVK
DALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNN
VTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALT
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1158 bp

>NTDB_id=473515 SY91_RS00660 WP_124477317.1 137557..138714(+) (pilA) [Burkholderia cenocepacia strain PS27]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAAGCGGCCGAAGCGGCGCCCGTGCTCGACGCGCCGCCCGCGGCCGACGTGCCGCAGGCGAGCGCGCAACCGGCCG
CGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCG
CCGCTGCAGGACGCGTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGTTCGAGCATCAC
CGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCG
TCGACGCGACCGAATACCTGCTCGACGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAACAGGTGAAG
GATGCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGT
GATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACC
AGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAAC
GTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGGGCGCGCAAGAT
CGACGTGATGATGGCCGACACGGCTGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAATTGAAGAAGGTGAAGCGCG
TGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACG
CAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGAT
TCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGT
TCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (186-385)

• SRP54-type protein, helical bundle domain (SRP54_N) (103-165)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.579