Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H4W19_RS17300 Genome accession   NZ_CP060028
Coordinates   3726672..3727073 (+) Length   133 a.a.
NCBI ID   WP_162110591.1    Uniprot ID   -
Organism   Pseudoxanthomonas mexicana strain GTZY     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3721672..3732073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4W19_RS17280 (H4W19_17280) - 3721770..3723815 (+) 2046 WP_185895334.1 ATP-dependent DNA helicase -
  H4W19_RS17285 (H4W19_17285) tsaB 3723858..3724598 (+) 741 WP_185895335.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  H4W19_RS17290 (H4W19_17290) - 3724608..3725483 (-) 876 WP_185895336.1 energy transducer TonB -
  H4W19_RS17295 (H4W19_17295) gshB 3725485..3726429 (-) 945 WP_185895337.1 glutathione synthase -
  H4W19_RS17300 (H4W19_17300) pilG 3726672..3727073 (+) 402 WP_162110591.1 twitching motility response regulator PilG Regulator
  H4W19_RS17305 (H4W19_17305) - 3727127..3727657 (+) 531 WP_162110615.1 chemotaxis protein CheW -
  H4W19_RS17310 (H4W19_17310) - 3727692..3729728 (+) 2037 WP_185895338.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14834.07 Da        Isoelectric Point: 7.1357

>NTDB_id=473425 H4W19_RS17300 WP_162110591.1 3726672..3727073(+) (pilG) [Pseudoxanthomonas mexicana strain GTZY]
MTQNEGQAGGFHGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKSTPVIMLSSKDSLFDKARGRIVGSEQYLTKPFTREELLDAIRAHVST

Nucleotide


Download         Length: 402 bp        

>NTDB_id=473425 H4W19_RS17300 WP_162110591.1 3726672..3727073(+) (pilG) [Pseudoxanthomonas mexicana strain GTZY]
ATGACGCAAAACGAAGGCCAGGCCGGTGGATTCCACGGCCTACGGGTCATGGTGATCGATGACTCGAAAACCATCCGCCG
CACCGCGGAGACCCTGCTCAAGCGGGAGGGTTGCGAAGTGGTGACCGCGACGGACGGGTTCGAGGCCCTGGCCAAGATCG
CGGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGATCAAG
AACAACCAGGTGTTCAAGTCCACGCCGGTCATCATGCTGTCGTCCAAGGACAGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCCATCCGCGCCCACGTCAGCACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.233

0.699