Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | HPRAE_RS00920 | Genome accession | NC_017455 |
| Coordinates | 204369..205310 (+) | Length | 313 a.a. |
| NCBI ID | WP_014552370.1 | Uniprot ID | E3DME2 |
| Organism | Halanaerobium praevalens DSM 2228 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 199369..210310
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPRAE_RS10985 (Hprae_0171) | - | 199483..199632 (+) | 150 | WP_014552363.1 | FeoB-associated Cys-rich membrane protein | - |
| HPRAE_RS00890 (Hprae_0172) | - | 199712..200002 (+) | 291 | WP_014552364.1 | DUF2325 domain-containing protein | - |
| HPRAE_RS00895 (Hprae_0173) | - | 200057..200764 (+) | 708 | WP_014552365.1 | HD-GYP domain-containing protein | - |
| HPRAE_RS00900 (Hprae_0174) | - | 200788..201282 (+) | 495 | WP_014552366.1 | flavodoxin | - |
| HPRAE_RS00905 (Hprae_0175) | - | 201389..201727 (+) | 339 | WP_014552367.1 | DUF2023 family protein | - |
| HPRAE_RS00910 (Hprae_0176) | - | 201755..202201 (+) | 447 | WP_014552368.1 | Fur family transcriptional regulator | - |
| HPRAE_RS00915 (Hprae_0177) | - | 202240..204288 (+) | 2049 | WP_014552369.1 | methyl-accepting chemotaxis protein | - |
| HPRAE_RS00920 (Hprae_0178) | ceuB | 204369..205310 (+) | 942 | WP_014552370.1 | iron chelate uptake ABC transporter family permease subunit | Machinery gene |
| HPRAE_RS00925 (Hprae_0179) | - | 205310..206260 (+) | 951 | WP_014552371.1 | iron chelate uptake ABC transporter family permease subunit | - |
| HPRAE_RS00930 (Hprae_0180) | - | 206257..207012 (+) | 756 | WP_014552372.1 | ATP-binding cassette domain-containing protein | - |
| HPRAE_RS00935 (Hprae_0181) | - | 207069..207977 (+) | 909 | WP_014552373.1 | siderophore ABC transporter substrate-binding protein | - |
| HPRAE_RS10845 (Hprae_0182) | - | 208340..209341 (+) | 1002 | WP_014552374.1 | AraC family transcriptional regulator | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 34362.75 Da Isoelectric Point: 10.3457
>NTDB_id=47340 HPRAE_RS00920 WP_014552370.1 204369..205310(+) (ceuB) [Halanaerobium praevalens DSM 2228]
MKKRYLLLIIFILALISLFLGVSQFSILDIFKLTKAKQNILFLSRIPRLISIITAGMGISIAGLIMQQISQNKFVSPTTA
ATIDSAQLGILTALIFFPGAKLLAKMSLAFLFAVIGSLLFMSILKKIKVKSVVIIPLVGIMLGRIISATSSFFAYRYQLV
QNLSAWMQGDFSMIIEGRYELLYLSIPLIIVAYLYANQFTMTGLGEDFSKNLGLNYRLYVNLGIVIVALISAAVVITVGR
IPFLGLIIPNLVTMYYGDNLKQNIMPTALVGAAFLLAADILGRLVIYPYEIPIGLVVGVLGSFIFILLIRSDS
MKKRYLLLIIFILALISLFLGVSQFSILDIFKLTKAKQNILFLSRIPRLISIITAGMGISIAGLIMQQISQNKFVSPTTA
ATIDSAQLGILTALIFFPGAKLLAKMSLAFLFAVIGSLLFMSILKKIKVKSVVIIPLVGIMLGRIISATSSFFAYRYQLV
QNLSAWMQGDFSMIIEGRYELLYLSIPLIIVAYLYANQFTMTGLGEDFSKNLGLNYRLYVNLGIVIVALISAAVVITVGR
IPFLGLIIPNLVTMYYGDNLKQNIMPTALVGAAFLLAADILGRLVIYPYEIPIGLVVGVLGSFIFILLIRSDS
Nucleotide
Download Length: 942 bp
>NTDB_id=47340 HPRAE_RS00920 WP_014552370.1 204369..205310(+) (ceuB) [Halanaerobium praevalens DSM 2228]
ATGAAAAAAAGATATTTGTTATTAATAATTTTTATTTTGGCTTTAATTTCTCTTTTTTTGGGAGTTAGCCAGTTTTCAAT
TTTAGATATTTTTAAGCTGACAAAAGCAAAACAAAATATTTTGTTTTTAAGTAGAATACCAAGGTTAATAAGTATTATTA
CGGCGGGAATGGGAATTAGTATTGCTGGTCTAATTATGCAGCAAATAAGTCAAAATAAATTTGTTTCACCAACTACTGCA
GCTACAATTGATTCAGCTCAGCTTGGTATTTTGACTGCTTTAATTTTTTTTCCAGGAGCAAAGCTTTTAGCTAAAATGTC
TTTGGCTTTTCTTTTTGCTGTAATTGGTAGTCTGCTTTTTATGTCTATTTTAAAAAAAATCAAAGTAAAAAGTGTTGTGA
TAATTCCTTTGGTTGGTATTATGTTAGGTAGAATAATATCTGCCACCAGTAGTTTTTTTGCTTACCGTTATCAACTGGTA
CAAAATTTATCTGCTTGGATGCAGGGAGATTTTTCCATGATAATTGAAGGCAGATATGAACTTTTATATTTAAGTATTCC
TTTAATCATTGTTGCTTATTTATATGCAAATCAATTTACAATGACTGGCTTAGGAGAAGATTTCTCGAAGAATTTAGGTC
TAAATTATCGTTTATATGTAAACTTAGGCATAGTGATTGTAGCTTTAATCTCAGCAGCAGTCGTAATTACAGTTGGTAGA
ATTCCTTTTTTAGGTTTAATTATTCCTAATTTGGTAACTATGTATTATGGTGATAATTTAAAGCAAAATATAATGCCAAC
TGCTTTAGTGGGAGCAGCCTTTCTTTTGGCTGCTGATATTTTAGGCAGGCTAGTTATTTATCCTTATGAAATACCAATTG
GTCTGGTAGTAGGGGTTTTAGGCAGTTTTATTTTCATTTTACTAATTAGGAGTGACAGCTAA
ATGAAAAAAAGATATTTGTTATTAATAATTTTTATTTTGGCTTTAATTTCTCTTTTTTTGGGAGTTAGCCAGTTTTCAAT
TTTAGATATTTTTAAGCTGACAAAAGCAAAACAAAATATTTTGTTTTTAAGTAGAATACCAAGGTTAATAAGTATTATTA
CGGCGGGAATGGGAATTAGTATTGCTGGTCTAATTATGCAGCAAATAAGTCAAAATAAATTTGTTTCACCAACTACTGCA
GCTACAATTGATTCAGCTCAGCTTGGTATTTTGACTGCTTTAATTTTTTTTCCAGGAGCAAAGCTTTTAGCTAAAATGTC
TTTGGCTTTTCTTTTTGCTGTAATTGGTAGTCTGCTTTTTATGTCTATTTTAAAAAAAATCAAAGTAAAAAGTGTTGTGA
TAATTCCTTTGGTTGGTATTATGTTAGGTAGAATAATATCTGCCACCAGTAGTTTTTTTGCTTACCGTTATCAACTGGTA
CAAAATTTATCTGCTTGGATGCAGGGAGATTTTTCCATGATAATTGAAGGCAGATATGAACTTTTATATTTAAGTATTCC
TTTAATCATTGTTGCTTATTTATATGCAAATCAATTTACAATGACTGGCTTAGGAGAAGATTTCTCGAAGAATTTAGGTC
TAAATTATCGTTTATATGTAAACTTAGGCATAGTGATTGTAGCTTTAATCTCAGCAGCAGTCGTAATTACAGTTGGTAGA
ATTCCTTTTTTAGGTTTAATTATTCCTAATTTGGTAACTATGTATTATGGTGATAATTTAAAGCAAAATATAATGCCAAC
TGCTTTAGTGGGAGCAGCCTTTCTTTTGGCTGCTGATATTTTAGGCAGGCTAGTTATTTATCCTTATGAAATACCAATTG
GTCTGGTAGTAGGGGTTTTAGGCAGTTTTATTTTCATTTTACTAATTAGGAGTGACAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
50.654 |
97.764 |
0.495 |