Detailed information NTG0047327

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: KN400_RS01825
• Genome accession: NC_017454
• Coordinates: 129229..130245 (+)
• Length: 338 a.a.
• NCBI ID: WP_010940821.1
• Uniprot ID: P62215
• Organism: Geobacter sulfurreducens KN400
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 124229..135245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KN400_RS01810 (KN400_0118)	-	125233..125685 (+)	453	WP_010940818.1	phosphatidylglycerophosphatase A	-
KN400_RS01815 (KN400_0119)	-	125682..126923 (+)	1242	WP_010940819.1	competence/damage-inducible protein A	-
KN400_RS01820 (KN400_0120)	-	126967..129096 (+)	2130	WP_010940820.1	sensor histidine kinase	-
KN400_RS01825 (KN400_0121)	recA	129229..130245 (+)	1017	WP_010940821.1	recombinase RecA	Machinery gene
KN400_RS01830 (KN400_0122)	-	130249..131409 (+)	1161	WP_010940822.1	type IV pilus twitching motility protein PilT	-
KN400_RS01835 (KN400_0123)	-	131438..131917 (+)	480	WP_010940823.1	regulatory protein RecX	-
KN400_RS01840 (KN400_0124)	alaS	131989..134616 (+)	2628	WP_010940824.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 36238.82 Da
• Isoelectric Point: 5.8929

>NTDB_id=47327 KN400_RS01825 WP_010940821.1 129229..130245(+) (recA) [Geobacter sulfurreducens KN400]
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIA
AEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQGRENSRLFLKERPELVNEIE
GKVYDVAGIPRKGAKEAA

Nucleotide

• Length: 1017 bp

>NTDB_id=47327 KN400_RS01825 WP_010940821.1 129229..130245(+) (recA) [Geobacter sulfurreducens KN400]
GTGACCCAAGAACGCGAAAAGGCGATAGAGCTTGCGCTCAGCCAGATAGAAAAGCAGTTCGGCAAGGGGGCGATCATGCG
CCTCGGGGCGGATGAGGCCCTCCCCGATGTGGCCGCCATCCCCACCGGTTCCCTCTCCCTCGACCTGGCCCTCGGCGTCG
GCGGCGTCCCCCGCGGGCGGATTATCGAGATCTACGGACCCGAGTCGTCGGGCAAGACGACGCTCGCCCTGCACATCGCG
GCCGAGGCCCAGAAAATGGGCGGCATCGCTGCCTTCGTCGACGCCGAGCACGCGCTCGATATCGGCTATGCCCGCAAACT
CGGCGTCAAGACGGACGACCTGCTCGTCTCCCAGCCCGACACCGGGGAGCAAGCCTTGGAAATTGCCGAGATGCTCGTCA
GAAGCGGCGCTGTGGACGTCCTCGTCATCGACTCGGTGGCGGCACTGGTTCCCAAGGCCGAGATCGAAGGGGAGATGGGC
GACTCCCACATGGGGCTCCAGGCCCGGCTCATGTCTCAGGCCCTGCGCAAGCTCACCGGCATAATCTCCAAGTCCAACTG
CTGCGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACG
CCCTCAAGTTTTACGCCTCGGTACGTCTCGATATCCGCAAGATCGCATCCCTCAAGCAAGGGCAGGACGTCATCGGCTCC
CGCACCAAGGTGAAGGTGGTCAAGAACAAGGTGGCTCCCCCCTTCAAAGAGGTGGAGTTCGACATTTACTACGGTGAGGG
CATTTCCCGCGAGGGCGACATCCTCGACCTGGCCGTGGAGAAGGGGATCGTGGACAAGAGCGGCGCCTGGTTCTCCTACG
GCGGAGACCGGATTGGCCAGGGGCGCGAAAATTCCCGCCTTTTCCTCAAGGAGCGGCCAGAACTGGTGAACGAGATCGAA
GGGAAGGTTTACGACGTGGCCGGCATTCCCCGCAAAGGGGCGAAGGAAGCGGCATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: P62215

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.257	98.817	0.704
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.576	97.633	0.66
recA	Glaesserella parasuis strain SC1401	68.519	95.858	0.657
recA	Pseudomonas stutzeri DSM 10701	68.421	95.562	0.654
recA	Acinetobacter baylyi ADP1	68.75	94.675	0.651
recA	Acinetobacter baumannii D1279779	67.802	95.562	0.648
recA	Helicobacter pylori 26695	66.565	97.337	0.648
recA	Helicobacter pylori strain NCTC11637	66.565	97.337	0.648
recA	Bacillus subtilis subsp. subtilis str. 168	66.061	97.633	0.645
recA	Neisseria gonorrhoeae MS11	66.261	97.337	0.645
recA	Neisseria gonorrhoeae strain FA1090	66.261	97.337	0.645
recA	Neisseria gonorrhoeae MS11	66.261	97.337	0.645
recA	Vibrio cholerae O1 biovar El Tor strain E7946	66.258	96.45	0.639
recA	Vibrio cholerae strain A1552	66.258	96.45	0.639
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	66.77	95.266	0.636
recA	Latilactobacillus sakei subsp. sakei 23K	62.651	98.225	0.615
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.692	96.154	0.612
recA	Streptococcus pyogenes NZ131	62.963	95.858	0.604
recA	Streptococcus pneumoniae Rx1	61.818	97.633	0.604
recA	Streptococcus pneumoniae D39	61.818	97.633	0.604
recA	Streptococcus pneumoniae R6	61.818	97.633	0.604
recA	Streptococcus pneumoniae TIGR4	61.818	97.633	0.604
recA	Lactococcus lactis subsp. cremoris KW2	61.515	97.633	0.601
recA	Streptococcus mitis SK321	62.346	95.858	0.598
recA	Streptococcus mitis NCTC 12261	62.346	95.858	0.598
recA	Streptococcus mutans UA159	62.346	95.858	0.598