Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   H4O16_RS20810 Genome accession   NZ_CP059975
Coordinates   4027796..4028254 (+) Length   152 a.a.
NCBI ID   WP_000804862.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain G03     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4022796..4033254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4O16_RS20795 (H4O16_20620) - 4023466..4023702 (+) 237 WP_000283738.1 hypothetical protein -
  H4O16_RS20800 (H4O16_20625) - 4023863..4025971 (-) 2109 WP_000421682.1 polyphosphate kinase -
  H4O16_RS20805 (H4O16_20630) - 4026080..4027654 (-) 1575 WP_003285197.1 Ppx/GppA family phosphatase -
  H4O16_RS20810 (H4O16_20635) kre 4027796..4028254 (+) 459 WP_000804862.1 YkyB family protein Regulator
  H4O16_RS20815 (H4O16_20640) - 4028286..4028948 (-) 663 WP_000922482.1 YkyA family protein -
  H4O16_RS20820 (H4O16_20645) - 4029563..4030216 (-) 654 WP_021727655.1 diguanylate cyclase domain-containing protein -
  H4O16_RS20825 (H4O16_20650) - 4030380..4030613 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  H4O16_RS20830 (H4O16_20655) - 4030645..4031145 (-) 501 WP_000708120.1 hypothetical protein -
  H4O16_RS20835 (H4O16_20660) - 4031559..4033100 (+) 1542 WP_021727654.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=473037 H4O16_RS20810 WP_000804862.1 4027796..4028254(+) (kre) [Bacillus thuringiensis strain G03]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTIQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=473037 H4O16_RS20810 WP_000804862.1 4027796..4028254(+) (kre) [Bacillus thuringiensis strain G03]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTGGCAAAAAAAACAATTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487