Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   R2846_RS02965 Genome accession   NC_017452
Coordinates   590601..592967 (+) Length   788 a.a.
NCBI ID   WP_014550611.1    Uniprot ID   -
Organism   Haemophilus influenzae R2846     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 585601..597967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2846_RS02940 (R2846_0580) - 585950..587248 (-) 1299 WP_014550608.1 N-acetylmuramoyl-L-alanine amidase -
  R2846_RS02945 (R2846_0581) tsaE 587256..587732 (-) 477 WP_005657736.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  R2846_RS02950 (R2846_0582) folK 587808..588290 (-) 483 WP_014550609.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  R2846_RS02955 (R2846_0583) pcnB 588299..589657 (-) 1359 WP_014550610.1 polynucleotide adenylyltransferase PcnB -
  R2846_RS02960 (R2846_0584) dksA 589904..590341 (-) 438 WP_005657744.1 RNA polymerase-binding protein DksA -
  R2846_RS02965 (R2846_0585) rec2 590601..592967 (+) 2367 WP_014550611.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  R2846_RS02970 (R2846_0586) msbA 593008..594771 (+) 1764 WP_014550612.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  R2846_RS02975 (R2846_0587) lpxK 594844..595842 (+) 999 WP_014550613.1 tetraacyldisaccharide 4'-kinase -
  R2846_RS02980 (R2846_0588) kdsB 595913..596677 (+) 765 WP_005663240.1 3-deoxy-manno-octulosonate cytidylyltransferase -

Sequence

Protein


Download         Length: 788 a.a.        Molecular weight: 89382.90 Da        Isoelectric Point: 10.0340

>NTDB_id=47299 R2846_RS02965 WP_014550611.1 590601..592967(+) (rec2) [Haemophilus influenzae R2846]
MKLNLITLAVLLIVADLTLLFLPQPLLLPWQVAFVIALVLIFLFIFLRRNFLVSLAFFVASLGYFHYSALSLLQQAQNIT
AQKQVVTFKIQEILHQQDYQTLIATATLANNLQEQRIFLNWKAKEVPQLSEIWQAEISLRPLSARLNFGGFDRQQWYFSK
GITAVGTVKSAVKIADVSSLRAEKLQQVKKQTEGLSLQGLLIALAFGERAWLDKTTWSIYQQTNTAHLIAISGLHIGLAM
GIGFCLVRVVQVFFPTRFIHPYFPLVFGVLFALIYAYLAGFSVPTFRAISALVFVLFIQIMRRHYSPIQLFTVVVGFLLF
CDPLMPLSVSFWLSCGAVGCLILWYRYVPFSLFQWKNRPFSPKVRWILSLFHLQFGLLLFFTPLQLFLFNGLSLSGFLAN
LMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGSTGLISVFQGNWFNVSFNLALVLTALCAGIFMLIIWRIYREPE
VSSSTWKIKRPRFFTLNLSKPLLKNERINVLRCSFGIILLCFTILLFKQFSKSTWQVDTLDVGQGLATLIVKNGKGILYD
TGSSWRGGSMAELEILPYLQREGIVLEKLILSHDDNDHAGGASTILKAYPNVELITPSQKNYGENYRTFCTAGRDWHWQG
LHFQILSPHNVVTRADNPHSCVILVDDGKHSVLLTGDAEAKNEQIFARALGKIDVLQVGHHGSKTSTSEYLLSQVRPDVA
IISSGRWNPWKFPHYSVMERLHRYKSAVENTAVSGQVRVNFFQDRLEIQQARTKFSPWYARVIGLSKE

Nucleotide


Download         Length: 2367 bp        

>NTDB_id=47299 R2846_RS02965 WP_014550611.1 590601..592967(+) (rec2) [Haemophilus influenzae R2846]
ATGAAATTAAACTTAATAACTTTAGCTGTCTTGTTAATTGTCGCGGATTTAACGTTGTTATTTCTACCGCAACCGTTGCT
ATTGCCTTGGCAAGTTGCTTTCGTTATTGCGCTTGTTTTGATTTTTCTTTTTATTTTCTTGCGTAGAAATTTCTTAGTTA
GCCTTGCTTTTTTTGTTGCCTCTCTTGGCTATTTTCATTATTCGGCTTTGAGTTTATTACAACAAGCTCAAAATATTACC
GCTCAAAAGCAAGTGGTAACTTTTAAGATTCAAGAAATTTTGCACCAACAGGATTATCAAACGCTTATCGCCACAGCAAC
ATTGGCGAATAATTTGCAAGAACAACGAATTTTCTTAAATTGGAAAGCGAAAGAGGTGCCTCAATTATCGGAAATTTGGC
AAGCTGAAATTTCTTTACGTCCCCTTTCTGCACGATTAAATTTTGGTGGGTTTGATCGGCAACAATGGTATTTTTCAAAA
GGAATTACGGCTGTTGGAACGGTAAAAAGTGCGGTGAAAATTGCGGATGTTTCATCATTGCGAGCAGAAAAATTGCAACA
AGTGAAAAAACAAACAGAAGGGTTGTCCTTACAAGGTTTATTGATTGCCTTAGCTTTTGGCGAACGGGCTTGGTTAGATA
AAACCACTTGGTCAATTTACCAACAAACCAATACCGCACATCTTATTGCTATTTCTGGCTTACATATTGGGTTGGCTATG
GGAATTGGATTTTGCTTGGTGCGTGTTGTGCAAGTATTTTTCCCCACCCGTTTTATTCATCCTTATTTTCCTTTAGTTTT
TGGTGTTTTATTTGCTTTAATTTATGCGTATTTGGCTGGTTTTAGCGTGCCAACTTTTCGTGCCATTTCAGCACTTGTTT
TCGTTTTATTTATTCAAATAATGAGGCGACATTATTCGCCCATTCAGCTTTTTACGGTGGTTGTCGGATTCTTGCTTTTC
TGCGATCCATTAATGCCGCTTTCGGTCAGTTTTTGGCTTTCTTGTGGTGCAGTTGGGTGTTTGATCCTCTGGTATCGTTA
TGTGCCTTTTTCTCTTTTTCAATGGAAAAATCGCCCCTTTTCACCAAAAGTGCGGTGGATTTTGAGTTTATTTCATTTGC
AATTTGGGTTATTGCTTTTTTTTACACCTTTGCAACTTTTTCTATTTAATGGCTTATCGCTGAGTGGATTTTTAGCCAAT
CTTATGGCGGTTCCAATTTATAGTTTTTTGCTTGTGCCATTAATTTTATTTGCCGTTTTTACTAACGGCACAATGTTTTC
TTGGCAACTAGCAAACAAGTTAGCCGAAGGAAGTACTGGGTTAATTTCTGTTTTTCAAGGGAATTGGTTTAATGTTTCAT
TTAATTTAGCATTGGTTTTAACCGCACTTTGTGCAGGAATTTTTATGTTAATTATTTGGCGTATTTATCGAGAACCAGAG
GTTTCATCATCAACTTGGAAAATTAAACGACCAAGATTTTTTACATTGAATCTCAGTAAACCTTTGCTAAAAAATGAACG
AATCAACGTTTTGCGATGTTCTTTCGGCATTATCTTACTGTGTTTTACGATTTTGTTGTTTAAACAATTTAGTAAGTCAA
CTTGGCAGGTAGATACTTTAGATGTGGGGCAGGGCTTGGCAACGCTGATTGTGAAAAATGGCAAAGGGATTCTTTATGAT
ACGGGTTCTTCTTGGCGAGGTGGAAGTATGGCTGAGTTGGAAATTTTGCCTTATTTACAAAGAGAAGGGATTGTTTTGGA
AAAATTGATTTTAAGCCACGACGATAACGATCACGCAGGTGGTGCTTCAACAATTTTAAAGGCGTATCCCAATGTGGAAT
TAATTACCCCTTCGCAAAAAAATTATGGGGAAAATTACCGCACTTTTTGTACTGCTGGGCGTGATTGGCATTGGCAAGGG
TTGCATTTTCAAATACTTTCTCCTCACAACGTTGTGACACGAGCTGATAATCCCCATTCTTGTGTAATTTTAGTCGATGA
TGGAAAGCATAGCGTTTTGCTAACTGGCGACGCTGAAGCAAAAAATGAGCAAATTTTTGCCCGCGCTTTAGGCAAAATCG
ATGTGTTGCAAGTGGGGCATCATGGGAGTAAAACATCAACAAGTGAATACTTGCTTTCTCAGGTTAGACCAGATGTAGCG
ATTATTTCTAGTGGGCGTTGGAATCCGTGGAAATTCCCTCATTATTCGGTTATGGAAAGGCTTCATCGCTATAAAAGTGC
GGTAGAAAATACCGCTGTTTCGGGGCAAGTGCGGGTAAATTTTTTTCAAGACCGATTAGAAATCCAGCAAGCTCGCACAA
AATTTTCCCCTTGGTATGCGCGTGTAATTGGATTATCAAAGGAATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(541-725)

Competence protein (Competence)

(204-473)

Domain of unknown function (DUF4131) (DUF4131)

(29-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

96.574

100

0.966

Multiple sequence alignment