Detailed information NTG0472953

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H4986_RS05505
• Genome accession: NZ_CP059971
• Coordinates: 1031103..1032062 (+)
• Length: 319 a.a.
• NCBI ID: WP_057044069.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain C34
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1026103..1037062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4986_RS05485 (H4986_05485)	mtaB	1026682..1027932 (-)	1251	WP_002868672.1	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	-
H4986_RS05490 (H4986_05490)	-	1027929..1029500 (-)	1572	WP_002868671.1	mechanosensitive ion channel domain-containing protein	-
H4986_RS05495 (H4986_05495)	-	1029497..1030084 (-)	588	Protein_1075	3-dehydroquinate synthase	-
H4986_RS05500 (H4986_05500)	waaV	1030232..1031044 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
H4986_RS05505 (H4986_05505)	waaF	1031103..1032062 (+)	960	WP_057044069.1	glycosyltransferase family 9 protein	Regulator
H4986_RS05510 (H4986_05510)	gmhA	1032043..1032603 (-)	561	WP_002859252.1	D-sedoheptulose 7-phosphate isomerase	-
H4986_RS05515 (H4986_05515)	rfaE1	1032600..1033985 (-)	1386	WP_002859253.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H4986_RS05520 (H4986_05520)	rfaD	1033978..1034931 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
H4986_RS05525 (H4986_05525)	gmhB	1034932..1035493 (-)	562	Protein_1081	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H4986_RS05530 (H4986_05530)	-	1035574..1035876 (+)	303	WP_002852762.1	cytochrome c	-
H4986_RS05535 (H4986_05535)	ccoS	1035899..1036105 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=472953 H4986_RS05505 WP_057044069.1 1031103..1032062(+) (waaF) [Campylobacter jejuni strain C34]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=472953 H4986_RS05505 WP_057044069.1 1031103..1032062(+) (waaF) [Campylobacter jejuni strain C34]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94