Detailed information NTG0472931

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H4989_RS07675
• Genome accession: NZ_CP059970
• Coordinates: 1471887..1472846 (+)
• Length: 319 a.a.
• NCBI ID: WP_057044069.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain C57
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1466887..1477846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4989_RS07655 (H4989_07655)	-	1468421..1468966 (+)	546	WP_002858844.1	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	-
H4989_RS07660 (H4989_07660)	-	1468966..1470006 (+)	1041	WP_002923011.1	NAD-dependent epimerase/dehydratase family protein	-
H4989_RS07665 (H4989_07665)	-	1470015..1470989 (+)	975	Protein_1505	GDP-mannose 4,6-dehydratase	-
H4989_RS07670 (H4989_07670)	waaV	1471016..1471828 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
H4989_RS07675 (H4989_07675)	waaF	1471887..1472846 (+)	960	WP_057044069.1	glycosyltransferase family 9 protein	Regulator
H4989_RS07680 (H4989_07680)	gmhA	1472827..1473387 (-)	561	WP_002859252.1	D-sedoheptulose 7-phosphate isomerase	-
H4989_RS07685 (H4989_07685)	rfaE1	1473384..1474769 (-)	1386	WP_002859253.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H4989_RS07690 (H4989_07690)	rfaD	1474762..1475715 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
H4989_RS07695 (H4989_07695)	gmhB	1475716..1476277 (-)	562	Protein_1511	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H4989_RS07700 (H4989_07700)	-	1476358..1476660 (+)	303	WP_002852762.1	cytochrome c	-
H4989_RS07705 (H4989_07705)	ccoS	1476683..1476889 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=472931 H4989_RS07675 WP_057044069.1 1471887..1472846(+) (waaF) [Campylobacter jejuni strain C57]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=472931 H4989_RS07675 WP_057044069.1 1471887..1472846(+) (waaF) [Campylobacter jejuni strain C57]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94