Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H4989_RS05625 | Genome accession | NZ_CP059970 |
| Coordinates | 1077113..1077415 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C57 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1072113..1082415
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4989_RS05590 (H4989_05590) | - | 1072526..1073287 (+) | 762 | WP_002872533.1 | ATP-binding protein | - |
| H4989_RS05595 (H4989_05595) | - | 1073284..1073970 (+) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| H4989_RS05600 (H4989_05600) | thiD | 1073967..1074779 (+) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H4989_RS05605 (H4989_05605) | thiE | 1074769..1075401 (+) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| H4989_RS05610 (H4989_05610) | hemD | 1075379..1076008 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H4989_RS05615 (H4989_05615) | - | 1076005..1076457 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| H4989_RS05620 (H4989_05620) | - | 1076454..1077116 (-) | 663 | WP_146314457.1 | hypothetical protein | - |
| H4989_RS05625 (H4989_05625) | ctsT | 1077113..1077415 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H4989_RS05630 (H4989_05630) | proC | 1077412..1078143 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H4989_RS05635 (H4989_05635) | fliW | 1078143..1078532 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H4989_RS05640 (H4989_05640) | - | 1078693..1079340 (+) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| H4989_RS05645 (H4989_05645) | lon | 1079357..1081732 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| H4989_RS05650 (H4989_05650) | rpsR | 1081792..1082052 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=472924 H4989_RS05625 WP_002853046.1 1077113..1077415(-) (ctsT) [Campylobacter jejuni strain C57]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472924 H4989_RS05625 WP_002853046.1 1077113..1077415(-) (ctsT) [Campylobacter jejuni strain C57]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |