Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H4991_RS06620 | Genome accession | NZ_CP059968 |
| Coordinates | 1267871..1268173 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C197 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1262871..1273173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4991_RS06585 (H4991_06585) | - | 1263284..1264045 (+) | 762 | WP_002872533.1 | ATP-binding protein | - |
| H4991_RS06590 (H4991_06590) | - | 1264042..1264728 (+) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| H4991_RS06595 (H4991_06595) | thiD | 1264725..1265537 (+) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H4991_RS06600 (H4991_06600) | thiE | 1265527..1266159 (+) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| H4991_RS06605 (H4991_06605) | hemD | 1266137..1266766 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H4991_RS06610 (H4991_06610) | - | 1266763..1267215 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| H4991_RS06615 (H4991_06615) | - | 1267212..1267874 (-) | 663 | WP_146314457.1 | hypothetical protein | - |
| H4991_RS06620 (H4991_06620) | ctsT | 1267871..1268173 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H4991_RS06625 (H4991_06625) | proC | 1268170..1268901 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H4991_RS06630 (H4991_06630) | fliW | 1268901..1269290 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H4991_RS06635 (H4991_06635) | - | 1269451..1270098 (+) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| H4991_RS06640 (H4991_06640) | lon | 1270115..1272490 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| H4991_RS06645 (H4991_06645) | rpsR | 1272550..1272810 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=472875 H4991_RS06620 WP_002853046.1 1267871..1268173(-) (ctsT) [Campylobacter jejuni strain C197]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472875 H4991_RS06620 WP_002853046.1 1267871..1268173(-) (ctsT) [Campylobacter jejuni strain C197]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |