Detailed information NTG0472855

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H4991_RS00235
• Genome accession: NZ_CP059968
• Coordinates: 45497..46456 (-)
• Length: 319 a.a.
• NCBI ID: WP_057044069.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain C197
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 40497..51456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4991_RS00205 (H4991_00205)	ccoS	41454..41660 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
H4991_RS00210 (H4991_00210)	-	41683..41985 (-)	303	WP_002852762.1	cytochrome c	-
H4991_RS00215 (H4991_00215)	gmhB	42066..42627 (+)	562	Protein_41	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H4991_RS00220 (H4991_00220)	rfaD	42628..43581 (+)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
H4991_RS00225 (H4991_00225)	rfaE1	43574..44959 (+)	1386	WP_002859253.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H4991_RS00230 (H4991_00230)	gmhA	44956..45516 (+)	561	WP_002859252.1	D-sedoheptulose 7-phosphate isomerase	-
H4991_RS00235 (H4991_00235)	waaF	45497..46456 (-)	960	WP_057044069.1	glycosyltransferase family 9 protein	Regulator
H4991_RS00240 (H4991_00240)	waaV	46515..47327 (+)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
H4991_RS00245 (H4991_00245)	-	47429..47692 (+)	264	WP_251825825.1	hypothetical protein	-
H4991_RS00250 (H4991_00250)	-	47906..49660 (+)	1755	WP_146314545.1	hypothetical protein	-
H4991_RS00255 (H4991_00255)	-	49664..50431 (-)	768	WP_079555802.1	hypothetical protein	-
H4991_RS00260 (H4991_00260)	cysQ	50471..51235 (-)	765	WP_002851337.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=472855 H4991_RS00235 WP_057044069.1 45497..46456(-) (waaF) [Campylobacter jejuni strain C197]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=472855 H4991_RS00235 WP_057044069.1 45497..46456(-) (waaF) [Campylobacter jejuni strain C197]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94