Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H4993_RS03930 Genome accession   NZ_CP059966
Coordinates   755869..756837 (-) Length   322 a.a.
NCBI ID   WP_002868462.1    Uniprot ID   A0A5Z0B9N9
Organism   Campylobacter jejuni strain C203     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 750869..761837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4993_RS03905 (H4993_03905) - 752401..752955 (+) 555 WP_002868463.1 membrane protein -
  H4993_RS03915 (H4993_03915) ceuB 753181..754173 (-) 993 WP_002859640.1 enterochelin ABC transporter substrate-binding protein CeuB -
  H4993_RS03920 (H4993_03920) ceuD 754186..754941 (-) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  H4993_RS03925 (H4993_03925) ceuC 754938..755876 (-) 939 WP_182577173.1 iron chelate uptake ABC transporter family permease subunit -
  H4993_RS03930 (H4993_03930) ceuB 755869..756837 (-) 969 WP_002868462.1 ABC transporter permease Machinery gene
  H4993_RS03935 (H4993_03935) pldA 756923..757912 (-) 990 WP_002868461.1 phospholipase A -
  H4993_RS03940 (H4993_03940) mobA 757909..758484 (-) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  H4993_RS03945 (H4993_03945) - 758546..759853 (+) 1308 WP_002868460.1 NFACT family protein -
  H4993_RS03950 (H4993_03950) - 759855..760193 (+) 339 WP_002852397.1 hypothetical protein -
  H4993_RS03955 (H4993_03955) cdsA 760202..760927 (+) 726 WP_002834214.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35467.43 Da        Isoelectric Point: 9.6678

>NTDB_id=472812 H4993_RS03930 WP_002868462.1 755869..756837(-) (ceuB) [Campylobacter jejuni strain C203]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTIAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=472812 H4993_RS03930 WP_002868462.1 755869..756837(-) (ceuB) [Campylobacter jejuni strain C203]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTATAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Z0B9N9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991