Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H5A01_RS07550 | Genome accession | NZ_CP059964 |
| Coordinates | 1394259..1394561 (-) | Length | 100 a.a. |
| NCBI ID | WP_032582988.1 | Uniprot ID | A0A5Y9CSD3 |
| Organism | Campylobacter jejuni strain C1922C72 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1389259..1399561
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5A01_RS07515 (H5A01_07515) | - | 1389672..1390433 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| H5A01_RS07520 (H5A01_07520) | - | 1390430..1391116 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| H5A01_RS07525 (H5A01_07525) | thiD | 1391113..1391925 (+) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H5A01_RS07530 (H5A01_07530) | thiE | 1391915..1392547 (+) | 633 | WP_167843134.1 | thiamine phosphate synthase | - |
| H5A01_RS07535 (H5A01_07535) | hemD | 1392525..1393154 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H5A01_RS07540 (H5A01_07540) | - | 1393151..1393603 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| H5A01_RS07545 (H5A01_07545) | - | 1393600..1394262 (-) | 663 | WP_052778507.1 | hypothetical protein | - |
| H5A01_RS07550 (H5A01_07550) | ctsT | 1394259..1394561 (-) | 303 | WP_032582988.1 | transformation system protein | Machinery gene |
| H5A01_RS07555 (H5A01_07555) | proC | 1394558..1395292 (-) | 735 | WP_032582987.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H5A01_RS07560 (H5A01_07560) | fliW | 1395292..1395681 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H5A01_RS07565 (H5A01_07565) | - | 1395842..1396489 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| H5A01_RS07570 (H5A01_07570) | lon | 1396506..1398881 (+) | 2376 | WP_002852988.1 | endopeptidase La | - |
| H5A01_RS07575 (H5A01_07575) | rpsR | 1398942..1399202 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=472772 H5A01_RS07550 WP_032582988.1 1394259..1394561(-) (ctsT) [Campylobacter jejuni strain C1922C72]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=472772 H5A01_RS07550 WP_032582988.1 1394259..1394561(-) (ctsT) [Campylobacter jejuni strain C1922C72]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |