Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   H4K32_RS00760 Genome accession   NZ_CP059855
Coordinates   194714..195310 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain Pm9     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 189714..200310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4K32_RS00735 mobB 190090..190611 (-) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  H4K32_RS00740 glp 190572..191864 (-) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  H4K32_RS00745 - 191882..192901 (-) 1020 WP_024085243.1 molybdopterin-synthase adenylyltransferase MoeB -
  H4K32_RS00750 - 192953..193555 (-) 603 WP_024085242.1 molybdenum cofactor guanylyltransferase -
  H4K32_RS00755 - 193701..194693 (+) 993 WP_003154589.1 hypothetical protein -
  H4K32_RS00760 rok 194714..195310 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  H4K32_RS00765 - 195762..196220 (-) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  H4K32_RS00770 - 196508..197314 (+) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  H4K32_RS00775 - 197348..197593 (-) 246 WP_003154596.1 YkuS family protein -
  H4K32_RS00780 - 197654..198778 (-) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  H4K32_RS00785 dapD 198849..199559 (-) 711 WP_003154598.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  H4K32_RS00790 - 199641..200096 (-) 456 WP_003154599.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=472257 H4K32_RS00760 WP_003154591.1 194714..195310(-) (rok) [Bacillus velezensis strain Pm9]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=472257 H4K32_RS00760 WP_003154591.1 194714..195310(-) (rok) [Bacillus velezensis strain Pm9]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCAGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATCTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843