Detailed information NTG0047222

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FSU_RS13900
• Genome accession: NC_017448
• Coordinates: 3368713..3369816 (-)
• Length: 367 a.a.
• NCBI ID: WP_014546999.1
• Uniprot ID: C9RL11
• Organism: Fibrobacter succinogenes subsp. succinogenes S85
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3363713..3374816

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSU_RS13890 (FSU_2924)	-	3366392..3366835 (-)	444	WP_014546998.1	hypothetical protein	-
FSU_RS13895	-	3366916..3367899 (+)	984	WP_015732277.1	hypothetical protein	-
FSU_RS16360	-	3367819..3368595 (-)	777	WP_155808802.1	hypothetical protein	-
FSU_RS13900 (FSU_2927)	recA	3368713..3369816 (-)	1104	WP_014546999.1	recombinase RecA	Machinery gene
FSU_RS13905 (FSU_2928)	-	3369859..3370392 (-)	534	WP_157747960.1	CinA family protein	-
FSU_RS13910 (FSU_2929)	-	3370530..3371615 (+)	1086	WP_155808803.1	DUF5683 domain-containing protein	-
FSU_RS13915 (FSU_2930)	-	3371612..3372235 (-)	624	WP_014547000.1	histidine phosphatase family protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 39589.20 Da
• Isoelectric Point: 4.6953

>NTDB_id=47222 FSU_RS13900 WP_014546999.1 3368713..3369816(-) (recA) [Fibrobacter succinogenes subsp. succinogenes S85]
MAKKTTTPTSNLSSEKAKAVEAAIAQIEKNYGKGSIMALGQQPVEDIPVIPTGCIQLDMALGVGGFPRGRIIEIYGPESS
GKTTLALHAIAEAQKLGGVAAFIDAEHAFDAVYARKLGVDIESLLVSQPDTGEQALDIAETLVRSGAIDIIVVDSVAALV
PQAEINGEMGDNHVGLQARLMSQALRKLTGILSKSNTCMLFINQLRMKIGVMFGNPETTTGGNALKFYATQRIDIRRIAA
IKNGEEVIGNRTRVKIVKNKVAAPFTQCEFDILYGVGISREASILDLACELDIIQKSGSWFSYNNERIGQGRENTRLFLK
DNAELCSEIEQKIRESMKDVELFKLGENDAVDLGDDGDGEASIQEEA

Nucleotide

• Length: 1104 bp

>NTDB_id=47222 FSU_RS13900 WP_014546999.1 3368713..3369816(-) (recA) [Fibrobacter succinogenes subsp. succinogenes S85]
ATGGCCAAGAAAACAACAACACCCACCAGCAACCTTTCCAGCGAAAAAGCAAAAGCAGTCGAAGCAGCAATCGCCCAGAT
TGAAAAGAATTACGGTAAAGGTTCCATCATGGCCCTCGGTCAACAGCCTGTCGAAGACATCCCAGTCATCCCGACGGGTT
GCATCCAGCTTGACATGGCACTCGGCGTGGGAGGATTCCCCCGCGGCCGTATCATTGAAATTTACGGACCTGAATCTTCT
GGTAAGACGACGCTTGCCTTGCACGCCATCGCCGAAGCCCAGAAACTCGGCGGCGTAGCAGCATTCATCGATGCAGAACA
CGCTTTTGACGCGGTCTACGCCCGCAAGCTCGGTGTCGATATCGAATCGCTCCTCGTGTCCCAGCCGGATACCGGCGAAC
AGGCTCTTGACATCGCCGAAACGCTCGTGCGTTCTGGCGCCATCGACATCATCGTCGTGGACTCTGTGGCAGCCCTTGTG
CCGCAAGCCGAAATCAACGGTGAAATGGGCGACAACCACGTGGGTCTCCAAGCTCGCCTTATGTCCCAGGCTCTCCGCAA
GCTCACCGGCATTCTCTCCAAGTCCAACACCTGCATGCTCTTCATCAACCAGCTCCGTATGAAGATTGGCGTGATGTTCG
GCAACCCGGAAACGACCACCGGCGGTAATGCCCTCAAGTTCTACGCCACACAGCGTATCGACATCCGCCGCATCGCCGCC
ATCAAGAACGGCGAAGAAGTCATCGGTAACCGCACCCGCGTAAAGATTGTGAAGAACAAGGTCGCCGCTCCGTTTACCCA
GTGCGAATTTGACATACTCTACGGTGTGGGCATTTCTCGTGAAGCTTCCATCCTAGACCTCGCCTGCGAACTCGACATCA
TCCAAAAGAGCGGATCCTGGTTCAGCTACAACAACGAACGTATCGGCCAGGGTCGCGAAAATACCCGTCTCTTCTTGAAG
GACAACGCCGAACTCTGCAGCGAAATTGAACAGAAAATTCGCGAAAGCATGAAGGACGTAGAACTCTTCAAGCTCGGTGA
AAACGACGCAGTTGATCTTGGCGACGACGGTGACGGCGAAGCCAGTATACAAGAAGAAGCTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-279)

3D structure

• AlphaFold DB: C9RL11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	66.867	90.463	0.605
recA	Neisseria gonorrhoeae MS11	66.867	90.463	0.605
recA	Neisseria gonorrhoeae strain FA1090	66.867	90.463	0.605
recA	Ralstonia pseudosolanacearum GMI1000	67.073	89.373	0.599
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.663	93.733	0.597
recA	Bacillus subtilis subsp. subtilis str. 168	65.839	87.738	0.578
recA	Helicobacter pylori strain NCTC11637	64.526	89.101	0.575
recA	Helicobacter pylori 26695	64.22	89.101	0.572
recA	Acinetobacter baumannii D1279779	60	94.005	0.564
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.997	89.101	0.561
recA	Vibrio cholerae strain A1552	61.078	91.008	0.556
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.078	91.008	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	63.438	87.193	0.553
recA	Glaesserella parasuis strain SC1401	62.848	88.011	0.553
recA	Acinetobacter baylyi ADP1	61.656	88.828	0.548
recA	Pseudomonas stutzeri DSM 10701	61.35	88.828	0.545
recA	Streptococcus mitis NCTC 12261	53.763	100	0.545
recA	Streptococcus mitis SK321	53.763	100	0.545
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.754	91.826	0.54
recA	Streptococcus pneumoniae R6	52.989	100	0.531
recA	Streptococcus pneumoniae TIGR4	52.989	100	0.531
recA	Streptococcus pneumoniae Rx1	52.989	100	0.531
recA	Streptococcus pneumoniae D39	52.989	100	0.531
recA	Streptococcus pyogenes NZ131	57.44	91.553	0.526
recA	Streptococcus mutans UA159	57.143	91.553	0.523
recA	Lactococcus lactis subsp. cremoris KW2	55.556	93.188	0.518