Detailed information NTG0472218

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: H4P35_RS22785
• Genome accession: NZ_CP059848
• Coordinates: 4923213..4924253 (-)
• Length: 346 a.a.
• NCBI ID: WP_226849524.1
• Uniprot ID: -
• Organism: Achromobacter sp. 77
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4918213..4929253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4P35_RS22765 (H4P35_22710)	phnC	4918718..4919488 (+)	771	WP_128828945.1	phosphonate ABC transporter ATP-binding protein	-
H4P35_RS22770 (H4P35_22715)	phnE	4919485..4920372 (+)	888	WP_062839588.1	phosphonate ABC transporter, permease protein PhnE	-
H4P35_RS22775 (H4P35_22720)	phnE	4920369..4921193 (+)	825	WP_056325416.1	phosphonate ABC transporter, permease protein PhnE	-
H4P35_RS22780 (H4P35_22725)	-	4921440..4923098 (+)	1659	WP_180097810.1	CYTH and CHAD domain-containing protein	-
H4P35_RS22785 (H4P35_22730)	pilA	4923213..4924253 (-)	1041	WP_226849524.1	signal recognition particle-docking protein FtsY	Machinery gene
H4P35_RS22790 (H4P35_22735)	rsmD	4924732..4925337 (+)	606	WP_056325409.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
H4P35_RS22795 (H4P35_22740)	coaD	4925356..4925859 (+)	504	WP_056558877.1	pantetheine-phosphate adenylyltransferase	-
H4P35_RS22800 (H4P35_22745)	-	4925974..4926225 (+)	252	WP_042795127.1	YfhL family 4Fe-4S dicluster ferredoxin	-
H4P35_RS22805 (H4P35_22750)	-	4926222..4927445 (+)	1224	WP_226847106.1	benzoate/H(+) symporter BenE family transporter	-
H4P35_RS22810 (H4P35_22755)	-	4927465..4927851 (-)	387	WP_226847107.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 35996.48 Da
• Isoelectric Point: 8.5379

>NTDB_id=472218 H4P35_RS22785 WP_226849524.1 4923213..4924253(-) (pilA) [Achromobacter sp. 77]
MAPTPAPVVPAPAPVSAPAPVSTPAPVAAPAPVPEPAPAEAPKKASWLSRLKQGLSRTGQSIGGIFVGVKVDENLFEELE
SALIMADAGLEATEKLLTALRARVKKERIEDPAKVKTALRQLLADHLRPLERAFDLKRTQPLVVMIAGVNGAGKTTSIGK
LAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVSVISQDGGDPAAVAFDSVNAGRARGMGVVMVDTAGRLPTQLHL
MEELKKIRRVIGKADASAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVY
WIGVGESLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1041 bp

>NTDB_id=472218 H4P35_RS22785 WP_226849524.1 4923213..4924253(-) (pilA) [Achromobacter sp. 77]
ATCGCGCCCACGCCTGCACCCGTGGTCCCGGCGCCTGCGCCGGTATCAGCGCCTGCGCCAGTATCCACGCCTGCCCCTGT
CGCAGCCCCCGCACCCGTCCCGGAACCCGCACCCGCCGAGGCGCCCAAGAAGGCCTCGTGGCTGTCGCGCCTGAAGCAGG
GCTTGTCGCGCACCGGTCAGAGCATTGGCGGCATCTTCGTCGGCGTTAAGGTCGACGAGAACCTGTTCGAGGAACTCGAA
TCGGCCCTCATTATGGCCGATGCGGGCCTTGAGGCCACCGAGAAGCTCCTGACCGCGCTGCGCGCGCGCGTCAAGAAGGA
ACGCATCGAGGACCCGGCCAAGGTGAAGACGGCCCTGCGCCAGTTGCTGGCCGATCACCTGCGCCCACTGGAGCGCGCGT
TTGACCTGAAGCGCACGCAACCGCTGGTGGTGATGATTGCCGGCGTGAACGGCGCGGGCAAGACGACTTCCATCGGCAAG
CTGGCGCATACGTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCCGCCGGCGACACCTTCCGTGCCGCCGCGCGCGAGCA
ACTGGTGGAATGGGGCAGCCGCAACAACGTCAGCGTGATTTCGCAGGACGGCGGCGATCCGGCCGCGGTGGCGTTCGACT
CGGTCAACGCCGGCCGCGCACGCGGCATGGGCGTGGTGATGGTGGATACCGCCGGCCGCCTGCCCACGCAGCTGCACCTG
ATGGAAGAACTGAAGAAGATCCGCCGCGTCATCGGCAAGGCGGATGCGTCCGCGCCGCATGAGGTGCTGCTGGTGGTGGA
TGGCAACACGGGGCAGAATGCGCTGGCGCAGATCCGCGCGTTTGACGCTGCCATCAACCTGACCGGTCTGGTCGTGACCA
AGCTGGACGGCACGGCCAAGGGCGGCACGCTGGCGGCCGTTGCTGCCGGCAGCCAGGGCGTGCGTCCGGTGCCGGTGTAT
TGGATTGGCGTGGGCGAAAGCCTGGAAGACCTGCAGCCCTTCGTGGCGGACGAGTTCGCGGCGGCATTGCTGGCGGATTG
A

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (142-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (60-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.386	92.775	0.523