Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H3303_RS29080 Genome accession   NZ_CP059738
Coordinates   6565206..6565610 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. 29A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6560206..6570610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3303_RS29065 (H3303_29065) - 6562027..6564075 (-) 2049 WP_175555544.1 methyl-accepting chemotaxis protein -
  H3303_RS29070 (H3303_29070) - 6564230..6564769 (-) 540 WP_016985967.1 chemotaxis protein CheW -
  H3303_RS29075 (H3303_29075) pilH 6564780..6565145 (-) 366 WP_026000666.1 twitching motility response regulator PilH -
  H3303_RS29080 (H3303_29080) pilG 6565206..6565610 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  H3303_RS29085 (H3303_29085) gshB 6565836..6566807 (+) 972 WP_175555545.1 glutathione synthase -
  H3303_RS29090 (H3303_29090) - 6566915..6567814 (+) 900 WP_038358807.1 energy transducer TonB -
  H3303_RS29095 (H3303_29095) - 6567987..6568559 (+) 573 WP_016985971.1 YqgE/AlgH family protein -
  H3303_RS29100 (H3303_29100) ruvX 6568559..6568996 (+) 438 WP_016985972.1 Holliday junction resolvase RuvX -
  H3303_RS29105 (H3303_29105) pyrR 6569077..6569583 (+) 507 WP_016985973.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=471701 H3303_RS29080 WP_007913673.1 6565206..6565610(-) (pilG) [Pseudomonas sp. 29A]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=471701 H3303_RS29080 WP_007913673.1 6565206..6565610(-) (pilG) [Pseudomonas sp. 29A]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACGGCGATCGACGGTTTCGACGCCCTGGCGAAGATCGCCGATAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAA
GCCACGCCGGTGATCATGCTGTCATCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGATCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701