Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   H0H24_RS14755 Genome accession   NZ_CP059729
Coordinates   3136085..3136612 (+) Length   175 a.a.
NCBI ID   WP_000695069.1    Uniprot ID   A0A009IQZ1
Organism   Acinetobacter baumannii strain AbCTX13     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3131085..3141612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0H24_RS14740 (H0H24_14720) pilM 3133638..3134696 (+) 1059 WP_031950501.1 pilus assembly protein PilM Machinery gene
  H0H24_RS14745 (H0H24_14725) pilN 3134696..3135337 (+) 642 WP_000201225.1 PilN domain-containing protein Machinery gene
  H0H24_RS14750 (H0H24_14730) pilO 3135334..3136074 (+) 741 WP_000076101.1 type 4a pilus biogenesis protein PilO Machinery gene
  H0H24_RS14755 (H0H24_14735) pilP 3136085..3136612 (+) 528 WP_000695069.1 pilus assembly protein PilP Machinery gene
  H0H24_RS14760 (H0H24_14740) pilQ 3136675..3138840 (+) 2166 Protein_2917 type IV pilus secretin PilQ -
  H0H24_RS14765 (H0H24_14745) aroK 3138852..3139421 (+) 570 WP_000643712.1 shikimate kinase AroK -
  H0H24_RS14770 (H0H24_14750) aroB 3139450..3140532 (+) 1083 WP_001194249.1 3-dehydroquinate synthase -
  H0H24_RS14775 (H0H24_14755) - 3140548..3141423 (+) 876 WP_000218807.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19449.66 Da        Isoelectric Point: 8.9898

>NTDB_id=471608 H0H24_RS14755 WP_000695069.1 3136085..3136612(+) (pilP) [Acinetobacter baumannii strain AbCTX13]
MKIKQITLYVLACTVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=471608 H0H24_RS14755 WP_000695069.1 3136085..3136612(+) (pilP) [Acinetobacter baumannii strain AbCTX13]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTACTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCTTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009IQZ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

99.429

100

0.994
  comL Acinetobacter baylyi ADP1

71.839

99.429

0.714