Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | H3V20_RS05220 | Genome accession | NZ_CP059709 |
| Coordinates | 992224..992526 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain C41 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 987224..997526
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H3V20_RS05195 (H3V20_05195) | rpsR | 987587..987847 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| H3V20_RS05200 (H3V20_05200) | lon | 987907..990282 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| H3V20_RS05205 (H3V20_05205) | - | 990299..990946 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| H3V20_RS05210 (H3V20_05210) | fliW | 991107..991496 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| H3V20_RS05215 (H3V20_05215) | proC | 991496..992227 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| H3V20_RS05220 (H3V20_05220) | ctsT | 992224..992526 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| H3V20_RS05225 (H3V20_05225) | - | 992523..993185 (+) | 663 | WP_146314457.1 | hypothetical protein | - |
| H3V20_RS05230 (H3V20_05230) | - | 993182..993634 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| H3V20_RS05235 (H3V20_05235) | hemD | 993631..994260 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| H3V20_RS05240 (H3V20_05240) | thiE | 994238..994870 (-) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| H3V20_RS05245 (H3V20_05245) | thiD | 994860..995672 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| H3V20_RS05250 (H3V20_05250) | - | 995669..996355 (-) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| H3V20_RS05255 (H3V20_05255) | - | 996352..997113 (-) | 762 | WP_002872533.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=471502 H3V20_RS05220 WP_002853046.1 992224..992526(+) (ctsT) [Campylobacter jejuni strain C41]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=471502 H3V20_RS05220 WP_002853046.1 992224..992526(+) (ctsT) [Campylobacter jejuni strain C41]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |