Detailed information NTG0471491

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H3V20_RS02995
• Genome accession: NZ_CP059709
• Coordinates: 561689..562648 (+)
• Length: 319 a.a.
• NCBI ID: WP_057044069.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain C41
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 556689..567648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H3V20_RS02970 (H3V20_02970)	serC	556780..557856 (-)	1077	WP_002859430.1	phosphoserine transaminase	-
H3V20_RS02975 (H3V20_02975)	xseA	557866..559029 (-)	1164	WP_002859429.1	exodeoxyribonuclease VII large subunit	-
H3V20_RS02980 (H3V20_02980)	ubiE	559026..559733 (-)	708	WP_002859428.1	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	-
H3V20_RS02985 (H3V20_02985)	-	559736..560707 (-)	972	Protein_587	hypothetical protein	-
H3V20_RS02990 (H3V20_02990)	waaV	560818..561630 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
H3V20_RS02995 (H3V20_02995)	waaF	561689..562648 (+)	960	WP_057044069.1	glycosyltransferase family 9 protein	Regulator
H3V20_RS03000 (H3V20_03000)	gmhA	562629..563189 (-)	561	WP_002859252.1	D-sedoheptulose 7-phosphate isomerase	-
H3V20_RS03005 (H3V20_03005)	rfaE1	563186..564571 (-)	1386	WP_002859253.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H3V20_RS03010 (H3V20_03010)	rfaD	564564..565517 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
H3V20_RS03015 (H3V20_03015)	gmhB	565518..566079 (-)	562	Protein_593	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H3V20_RS03020 (H3V20_03020)	-	566160..566462 (+)	303	WP_002852762.1	cytochrome c	-
H3V20_RS03025 (H3V20_03025)	ccoS	566485..566691 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=471491 H3V20_RS02995 WP_057044069.1 561689..562648(+) (waaF) [Campylobacter jejuni strain C41]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=471491 H3V20_RS02995 WP_057044069.1 561689..562648(+) (waaF) [Campylobacter jejuni strain C41]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94