Detailed information NTG0471191

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CMOL_RS04310
• Genome accession: NZ_CP059597
• Coordinates: 860033..860974 (+)
• Length: 313 a.a.
• NCBI ID: WP_239819864.1
• Uniprot ID: -
• Organism: Campylobacter sp. RM10537
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 855033..865974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMOL_RS04285 (CMOL_0852)	-	855501..856385 (+)	885	WP_239819859.1	alpha-2,3-sialyltransferase	-
CMOL_RS04290 (CMOL_0853)	-	856376..857407 (+)	1032	WP_239819860.1	N-acetylneuraminate synthase family protein	-
CMOL_RS04295 (CMOL_0854)	neuC	857404..858519 (+)	1116	WP_239819861.1	UDP-N-acetylglucosamine 2-epimerase	-
CMOL_RS04300 (CMOL_0855)	-	858516..859187 (+)	672	WP_239819862.1	acylneuraminate cytidylyltransferase family protein	-
CMOL_RS04305 (CMOL_0856)	-	859170..859973 (-)	804	WP_239819863.1	glycosyltransferase family 2 protein	-
CMOL_RS04310 (CMOL_0857)	waaF	860033..860974 (+)	942	WP_239819864.1	lipopolysaccharide heptosyltransferase II	Regulator
CMOL_RS04315 (CMOL_0858)	-	860967..861743 (-)	777	WP_239819865.1	glycosyltransferase family 25 protein	-
CMOL_RS04320 (CMOL_0859)	gmhA	861743..862303 (-)	561	WP_239819866.1	D-sedoheptulose 7-phosphate isomerase	-
CMOL_RS04325 (CMOL_0860)	rfaE1	862296..863684 (-)	1389	WP_239819867.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CMOL_RS04330 (CMOL_0861)	rfaD	863677..864627 (-)	951	WP_239819868.1	ADP-glyceromanno-heptose 6-epimerase	-
CMOL_RS04335 (CMOL_0862)	-	864624..865142 (-)	519	WP_239819869.1	HAD family hydrolase	-
CMOL_RS04340 (CMOL_0863)	-	865314..865616 (+)	303	WP_239819870.1	c-type cytochrome	-
CMOL_RS04345 (CMOL_0864)	-	865647..865850 (-)	204	WP_239819871.1	cbb3-type cytochrome oxidase assembly protein	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36130.81 Da
• Isoelectric Point: 10.5066

>NTDB_id=471191 CMOL_RS04310 WP_239819864.1 860033..860974(+) (waaF) [Campylobacter sp. RM10537]
MKIFIHLPTWLGDAVMASAALYGIKKYFKDAEFILYGSFASTQLFKNFSHSKTIIEDRKKRYKQALKLRKEFKIDLAISF
RSSLSSKIILNILRAKKRYFFNKRKFKEEHQVLKYLYFIENALNFKIHSKELQLPIKRRFTHPLTLKNGKKILGINPGAT
FGSAKRWDASYFAEVAKEFSKSHEILIFGAGHGEQILCDEIEKLLKNSNIKAKNLCNKTSIQNLCQNIALCDLFITNDSG
PMHIAAAYKIKTIAIFGPTKFTQTSPWKNPNAKLVHLNLDCMPCMQKICPLKHHKCMKDLKPEMVMEKAKKFT

Nucleotide

• Length: 942 bp

>NTDB_id=471191 CMOL_RS04310 WP_239819864.1 860033..860974(+) (waaF) [Campylobacter sp. RM10537]
ATGAAAATTTTTATCCATCTTCCCACTTGGCTAGGCGATGCTGTAATGGCTTCAGCGGCTTTATATGGTATAAAAAAATA
TTTTAAAGATGCTGAGTTTATCCTTTATGGTTCTTTTGCTTCTACTCAGCTTTTTAAAAATTTTTCTCATTCTAAAACTA
TCATAGAAGATAGAAAAAAACGTTATAAACAAGCTTTGAAATTGCGTAAAGAATTTAAAATAGACCTTGCGATCTCTTTT
AGATCATCTTTGTCTTCTAAAATCATTTTAAATATATTAAGAGCAAAAAAAAGATATTTTTTCAATAAACGCAAATTTAA
AGAAGAGCATCAAGTTTTAAAATATCTTTATTTCATTGAAAATGCTTTAAATTTTAAAATTCATTCCAAAGAATTACAAC
TTCCGATTAAAAGAAGATTTACACATCCTCTAACACTCAAAAATGGTAAAAAAATTCTAGGGATCAATCCAGGGGCTACC
TTTGGAAGTGCTAAACGTTGGGATGCGAGTTATTTTGCCGAAGTGGCAAAAGAATTTTCAAAAAGCCATGAAATTTTAAT
TTTTGGTGCTGGACATGGGGAGCAAATTCTTTGCGATGAAATTGAAAAGCTTTTAAAAAATTCAAACATTAAGGCTAAAA
ATCTTTGCAATAAAACAAGCATTCAAAATTTATGTCAAAATATAGCCCTTTGTGATCTTTTTATAACAAATGATAGTGGA
CCTATGCATATAGCAGCTGCTTATAAGATAAAAACCATAGCAATCTTTGGTCCTACTAAATTTACTCAAACTTCACCTTG
GAAAAATCCTAATGCAAAATTAGTGCATTTAAATCTAGACTGTATGCCTTGTATGCAAAAAATTTGCCCTTTAAAACATC
ATAAATGCATGAAAGATTTAAAACCTGAAATGGTAATGGAAAAGGCTAAAAAATTTACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (97-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	74.598	99.361	0.741