Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   I6K87_RS09540 Genome accession   NZ_CP069892
Coordinates   1920822..1921280 (+) Length   152 a.a.
NCBI ID   WP_070670601.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1915822..1926280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS09525 (I6K87_09525) - 1917119..1919017 (+) 1899 WP_070670603.1 sucrose-specific PTS transporter subunit IIBC -
  I6K87_RS09530 (I6K87_09530) scrK 1919291..1920190 (+) 900 WP_049534497.1 fructokinase ScrK -
  I6K87_RS09535 (I6K87_09535) - 1920255..1920665 (+) 411 WP_059221459.1 peptide deformylase -
  I6K87_RS09540 (I6K87_09540) rcrR 1920822..1921280 (+) 459 WP_070670601.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  I6K87_RS09545 (I6K87_09545) rcrP 1921273..1923039 (+) 1767 WP_070670598.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09550 (I6K87_09550) rcrQ 1923029..1924789 (+) 1761 WP_003027423.1 ABC transporter ATP-binding protein Regulator
  I6K87_RS09555 (I6K87_09555) - 1924999..1925313 (+) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  I6K87_RS09560 (I6K87_09560) - 1925324..1925644 (+) 321 WP_003027417.1 PTS cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17897.91 Da        Isoelectric Point: 7.2466

>NTDB_id=471054 I6K87_RS09540 WP_070670601.1 1920822..1921280(+) (rcrR) [Streptococcus anginosus strain FDAARGOS_1357]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMDKIRDFFYEMDRCLLAGVSEEDLVIFFQVMGKFYQNIEKLEEGETNV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=471054 I6K87_RS09540 WP_070670601.1 1920822..1921280(+) (rcrR) [Streptococcus anginosus strain FDAARGOS_1357]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGGCGAAAAACGCATCTTATGATTCAAAAGATTGCCAAAGAGCGAGG
AATTGAATTTATGGCGGGTCCACAGGGGCAGGTATTGCATTTTGTGAACCACCGCGAAGATTGTGACAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGGATGGTGAAAAATGGCTTG
ATTTATCTGGAAGTGAGTGAGACCGATAAACGCGCTAAGATTATTCGTTTGACGCCGGAATCAAAAGAACGCATGGATAA
AATTCGTGATTTCTTTTATGAAATGGATCGTTGTCTATTAGCTGGCGTTTCAGAAGAGGATCTGGTCATTTTTTTTCAGG
TAATGGGAAAATTTTACCAGAATATTGAAAAATTAGAAGAAGGAGAAACGAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.466

96.053

0.408