Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   I6K87_RS07520 Genome accession   NZ_CP069892
Coordinates   1526242..1526388 (+) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1521242..1531388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS07495 (I6K87_07495) dnaA 1521705..1523048 (-) 1344 WP_003029515.1 chromosomal replication initiator protein DnaA -
  I6K87_RS07500 (I6K87_07500) spo0J 1523276..1524043 (-) 768 WP_059221676.1 ParB/RepB/Spo0J family partition protein Regulator
  I6K87_RS07505 (I6K87_07505) htrA 1524098..1525288 (-) 1191 WP_003029517.1 S1C family serine protease Regulator
  I6K87_RS07510 (I6K87_07510) rlmH 1525481..1525960 (+) 480 WP_049533214.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6K87_RS07520 (I6K87_07520) comC 1526242..1526388 (+) 147 WP_003029519.1 bacteriocin Regulator
  I6K87_RS07525 (I6K87_07525) comD/comD2 1526409..1527731 (+) 1323 WP_218969867.1 sensor histidine kinase Regulator
  I6K87_RS07530 (I6K87_07530) comE 1527731..1528480 (+) 750 WP_049517113.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=471029 I6K87_RS07520 WP_003029519.1 1526242..1526388(+) (comC) [Streptococcus anginosus strain FDAARGOS_1357]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=471029 I6K87_RS07520 WP_003029519.1 1526242..1526388(+) (comC) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396