Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   I6K87_RS07290 Genome accession   NZ_CP069892
Coordinates   1494581..1495354 (-) Length   257 a.a.
NCBI ID   WP_003040908.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1489581..1500354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS07275 (I6K87_07275) purC 1492477..1493184 (-) 708 WP_003032064.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  I6K87_RS07280 (I6K87_07280) - 1493344..1493589 (-) 246 WP_049533229.1 acyl carrier protein -
  I6K87_RS07285 (I6K87_07285) plsX 1493586..1494584 (-) 999 WP_049533228.1 phosphate acyltransferase PlsX -
  I6K87_RS07290 (I6K87_07290) recO 1494581..1495354 (-) 774 WP_003040908.1 DNA repair protein RecO Machinery gene
  I6K87_RS07295 (I6K87_07295) - 1495332..1496519 (-) 1188 WP_049533227.1 pyridoxal phosphate-dependent aminotransferase -
  I6K87_RS07300 (I6K87_07300) - 1496674..1497642 (-) 969 WP_003040848.1 ribose-phosphate diphosphokinase -
  I6K87_RS07305 (I6K87_07305) pcsB 1497775..1499001 (-) 1227 WP_003027163.1 peptidoglycan hydrolase PcsB -
  I6K87_RS07310 (I6K87_07310) mreD 1499111..1499611 (-) 501 WP_021001140.1 rod shape-determining protein MreD -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29956.32 Da        Isoelectric Point: 5.8518

>NTDB_id=471025 I6K87_RS07290 WP_003040908.1 1494581..1495354(-) (recO) [Streptococcus anginosus strain FDAARGOS_1357]
MLKSITSKGLVLYNRNFRENDKLVKIFTEQAGKRMFFVKHARNSKLNPVVQPLVVADFLMKINDDGLSYIDDYQGVTVFQ
HINHDLFTMAYATYVVALADASIQDNEIDSALFAFLQKTLELMEQGLDYEVLTNIFEIQILSRFGVSFNFHECCFCHRVG
LPFDFSFTYNGVLCPEHYNQDERRSHLDPNIPYLLDQFQAVQYSELETISLKPELKRQLRKVIDQIYEEYVGIHLKPKKF
IDSLGDWGEILKNKESK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=471025 I6K87_RS07290 WP_003040908.1 1494581..1495354(-) (recO) [Streptococcus anginosus strain FDAARGOS_1357]
ATGCTGAAATCCATCACAAGTAAAGGTTTGGTTCTCTATAATCGGAATTTCCGAGAAAATGATAAACTGGTCAAAATTTT
CACAGAGCAAGCTGGTAAGCGAATGTTTTTCGTGAAACATGCTAGAAATTCTAAGTTGAATCCGGTTGTCCAACCATTGG
TAGTGGCAGATTTTTTGATGAAAATAAATGATGACGGTTTGAGTTATATTGATGATTATCAAGGGGTCACAGTTTTCCAG
CATATCAATCATGATTTGTTTACAATGGCTTATGCGACTTATGTGGTAGCTCTAGCGGACGCTAGTATTCAGGATAATGA
AATAGATTCGGCTCTCTTTGCTTTTTTGCAAAAAACGTTGGAGCTGATGGAACAGGGCTTGGATTATGAGGTACTGACCA
ATATTTTTGAAATTCAAATTTTGTCACGTTTTGGTGTTTCTTTTAATTTCCATGAATGCTGCTTTTGCCACCGTGTAGGG
TTGCCGTTTGATTTTTCTTTTACTTATAACGGTGTTTTATGCCCAGAACATTACAACCAAGATGAGAGACGGAGTCATCT
GGATCCTAACATTCCTTACTTATTAGACCAATTTCAAGCGGTTCAATATAGTGAACTGGAGACCATTTCTTTGAAGCCTG
AATTGAAAAGACAATTACGAAAAGTGATTGATCAAATTTATGAAGAATATGTTGGGATTCATCTAAAGCCAAAAAAATTT
ATTGATTCTCTGGGAGACTGGGGAGAAATTTTAAAGAACAAGGAGTCGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(4-76)

Recombination protein O C terminal (RecO_C)

(84-236)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

74.118

99.222

0.735