Detailed information NTG0047097

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HP2018_RS07200
• Genome accession: NC_017381
• Coordinates: 1475309..1476751 (-)
• Length: 480 a.a.
• NCBI ID: WP_000749004.1
• Uniprot ID: -
• Organism: Helicobacter pylori 2018
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1470309..1481751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP2018_RS07175 (hp2018_1457)	recG	1471446..1473317 (-)	1872	WP_001156192.1	ATP-dependent DNA helicase RecG	-
HP2018_RS07180 (hp2018_1458)	-	1473394..1473741 (+)	348	WP_000837059.1	hypothetical protein	-
HP2018_RS07185 (hp2018_1459)	-	1473745..1474380 (+)	636	WP_000668038.1	outer membrane protein	-
HP2018_RS07190 (hp2018_1460)	-	1474377..1475129 (-)	753	WP_000767524.1	exodeoxyribonuclease III	-
HP2018_RS07200 (hp2018_1461)	comH	1475309..1476751 (-)	1443	WP_000749004.1	hypothetical protein	Machinery gene
HP2018_RS07210 (hp2018_1463)	dnaA	1476980..1478353 (-)	1374	WP_000380663.1	chromosomal replication initiator protein DnaA	-
HP2018_RS07215 (hp2018_1464)	-	1478506..1479048 (+)	543	WP_000895642.1	hypothetical protein	-
HP2018_RS07220 (hp2018_1465)	-	1479083..1479322 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HP2018_RS07225 (hp2018_1466)	glmS	1479323..1481116 (+)	1794	WP_000334334.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54696.56 Da
• Isoelectric Point: 7.1208

>NTDB_id=47097 HP2018_RS07200 WP_000749004.1 1475309..1476751(-) (comH) [Helicobacter pylori 2018]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNNTSNADASENNESNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=47097 HP2018_RS07200 WP_000749004.1 1475309..1476751(-) (comH) [Helicobacter pylori 2018]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCCAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAGACAAGTTTTAGGCGTTT
ATAATATCTCTTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTAAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCACCACCCACTGAAAAAACGCTCCCTAATAACAACACCTCTAACGCTGATG
CGAGTGAAAACAATGAAAGCAACGAAAATAGAGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAGGAATTT
GCATGTGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCC
AGAAGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAGCGCCCCAAACAAGACG
ACCAAATAGAGCCGACTTTTTATGAAACTAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAGGAGAGCAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAGGGGGTGTGCATGGCCTTGGAAATAGAAGAACAACCAC
GAGCCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.292	100	0.923