Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   I6K87_RS02730 Genome accession   NZ_CP069892
Coordinates   553095..554165 (-) Length   356 a.a.
NCBI ID   WP_022525126.1    Uniprot ID   A0ABD7NEF4
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 548095..559165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS02710 (I6K87_02710) - 548123..549115 (+) 993 WP_003029690.1 alpha-ketoacid dehydrogenase subunit beta -
  I6K87_RS02715 (I6K87_02715) - 549223..550266 (+) 1044 WP_049534048.1 dihydrolipoamide acetyltransferase -
  I6K87_RS02720 (I6K87_02720) lpdA 550298..552001 (+) 1704 WP_049534046.1 dihydrolipoyl dehydrogenase -
  I6K87_RS02725 (I6K87_02725) - 552010..552999 (+) 990 WP_003029695.1 lipoate--protein ligase -
  I6K87_RS02730 (I6K87_02730) xerS 553095..554165 (-) 1071 WP_022525126.1 tyrosine recombinase XerS Machinery gene
  I6K87_RS02735 (I6K87_02735) ffh 554351..555901 (-) 1551 WP_022525125.1 signal recognition particle protein -
  I6K87_RS02740 (I6K87_02740) - 555973..556305 (-) 333 WP_003024506.1 putative DNA-binding protein -
  I6K87_RS02745 (I6K87_02745) - 556421..557119 (-) 699 WP_204982738.1 GntR family transcriptional regulator -
  I6K87_RS02750 (I6K87_02750) guaA 557261..558820 (+) 1560 WP_003029705.1 glutamine-hydrolyzing GMP synthase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41288.36 Da        Isoelectric Point: 9.4292

>NTDB_id=470962 I6K87_RS02730 WP_022525126.1 553095..554165(-) (xerS) [Streptococcus anginosus strain FDAARGOS_1357]
MKREILLERIEKLKAIMPWYILEYYQSKLTVPYSFTTLYEYLKEYNRFFHWILDSGIADGSQIAEIPLLVLENMTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLYKYLTEEVENENGEPYFYRNVMKKVSTKKKRETLAARAENIKQK
LFLGEETEQFLNYIDDEYPKNLSNRALSSFDKNKERDLAIIALLLASGVRLSEAVNLDLKDLNLKMMVIEVTRKGGKRDS
VNVAAFAKAYLERYLEVRSKRYKAEKSDTALFLTEYRGAPNRIDASSVEKMVAKYSEDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDNL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=470962 I6K87_RS02730 WP_022525126.1 553095..554165(-) (xerS) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAACGTGAAATACTGTTAGAAAGAATTGAAAAACTAAAAGCTATCATGCCTTGGTACATTTTGGAATACTATCAGTC
TAAATTGACTGTTCCATACAGTTTTACAACCTTATATGAATACCTCAAAGAATATAATCGTTTTTTTCATTGGATTTTAG
ACTCTGGAATTGCTGATGGGTCACAGATTGCAGAAATTCCTCTGTTAGTATTGGAAAATATGACTAAAAAAGACATGGAA
GCGTTTATTCTTTACTTACGGGAGCGTCCATTGCTTAACGCTAATACCACGCAAAACGGAGTATCTCAAACCACTATTAA
TCGCACTCTTTCTGCTCTCTCTAGCCTTTATAAATATTTAACTGAAGAGGTGGAAAATGAGAATGGGGAACCTTATTTCT
ATCGTAATGTCATGAAAAAAGTGTCTACTAAGAAAAAGAGAGAGACTTTAGCTGCGCGCGCTGAAAACATCAAACAAAAA
CTCTTTTTGGGCGAAGAAACTGAACAATTTTTGAATTATATTGATGATGAATACCCTAAAAATTTATCAAATCGGGCTCT
CTCCTCTTTTGACAAAAATAAAGAGCGAGATTTGGCAATCATAGCACTGCTTCTTGCATCTGGTGTTCGTCTATCCGAGG
CAGTAAATCTTGATTTGAAAGACCTAAATCTCAAAATGATGGTCATTGAAGTTACTCGTAAGGGCGGGAAAAGAGATTCT
GTCAATGTTGCAGCTTTTGCCAAAGCTTATTTGGAAAGGTACCTGGAGGTTCGCTCTAAACGTTATAAAGCTGAAAAATC
AGACACTGCCCTATTTTTGACAGAATATAGAGGTGCTCCTAACCGGATTGATGCTTCTAGTGTAGAAAAGATGGTTGCTA
AGTATTCTGAAGATTTCAAAGTTCGAGTGACACCTCACAAACTCCGCCATACGCTGGCTACTCGACTTTATGATGCTACT
AAATCTCAAGTTTTGGTCAGTCATCAGCTAGGACATGCCAGTACTCAAGTTACAGACCTCTACACCCATATTGTTAATGA
CGAACAAAAAAATGCATTGGATAATTTATGA

Domains

Predicted by InterProScan.

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(33-122)

Phage integrase family (Phage_integrase)

(188-344)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0ABD7NEF4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

87.36

100

0.874