Detailed information NTG0047094

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: HP2018_RS06520
• Genome accession: NC_017381
• Coordinates: 1329274..1330587 (-)
• Length: 437 a.a.
• NCBI ID: WP_000653575.1
• Uniprot ID: -
• Organism: Helicobacter pylori 2018
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1324274..1335587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP2018_RS06490 (hp2018_1319)	nadC	1324737..1325558 (-)	822	WP_000405960.1	carboxylating nicotinate-nucleotide diphosphorylase	-
HP2018_RS06495 (hp2018_1320)	nadA	1325558..1326568 (-)	1011	WP_001141845.1	quinolinate synthase NadA	-
HP2018_RS06500 (hp2018_1321)	-	1326555..1327361 (-)	807	WP_000226151.1	phosphatidylserine decarboxylase	-
HP2018_RS06505 (hp2018_1322)	-	1327355..1327861 (-)	507	WP_000953095.1	DUF6115 domain-containing protein	-
HP2018_RS06510 (hp2018_1323)	-	1327874..1328368 (-)	495	WP_014534113.1	hypothetical protein	-
HP2018_RS06515 (hp2018_1324)	mqnP	1328361..1329203 (-)	843	WP_230078253.1	menaquinone biosynthesis prenyltransferase MqnP	-
HP2018_RS06520 (hp2018_1326)	comEC/comE3	1329274..1330587 (-)	1314	WP_000653575.1	ComEC/Rec2 family competence protein	Machinery gene
HP2018_RS06525 (hp2018_1327)	-	1330584..1332044 (-)	1461	WP_000349679.1	replicative DNA helicase	-
HP2018_RS06530 (hp2018_1328)	-	1332055..1333449 (-)	1395	WP_000954055.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
HP2018_RS08375	crdS	1333452..1334630 (-)	1179	WP_193365305.1	copper-sensing histidine kinase CrdS	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50105.85 Da
• Isoelectric Point: 9.8135

>NTDB_id=47094 HP2018_RS06520 WP_000653575.1 1329274..1330587(-) (comEC/comE3) [Helicobacter pylori 2018]
MKDKTFQGAFELLATPKEYSWCGVVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHLRHFIDSTHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQQRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKDSSFFKRSFQAIILS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISVSSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=47094 HP2018_RS06520 WP_000653575.1 1329274..1330587(-) (comEC/comE3) [Helicobacter pylori 2018]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTCATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCGATCAATCTCTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACGAGCCTGAACG
CTCAAATCCTGTTGCAATACCCTAAAACTAAAGATCAAAAAACTTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGATCAAGCCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
TGCGCCATTTCATTGACAGCACCCATTCCAACGCTTTGGTGGGTAATTTGTATCGAGCGTTATTCATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAACGCACTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
AAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAACAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTAAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCAATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTCTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAGATTCTTCTTTTTTCAAGCGATCGTTTCAAGCGATCATTTTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACCATCCCCACGATTTCGGTTTCTTCGCCTTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTGGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-380)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	93.822	100	0.938