Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   HBNCFIEN_RS12240 Genome accession   NZ_CP059576
Coordinates   2832558..2834771 (+) Length   737 a.a.
NCBI ID   WP_182391360.1    Uniprot ID   A0A7G4RIQ9
Organism   Legionella sp. PC997     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2827558..2839771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBNCFIEN_RS12225 (HBNCFIEN_02472) - 2829389..2830804 (+) 1416 WP_182391358.1 hypothetical protein -
  HBNCFIEN_RS12230 (HBNCFIEN_02473) - 2830962..2831948 (+) 987 WP_255464209.1 polysaccharide deacetylase family protein -
  HBNCFIEN_RS12235 (HBNCFIEN_02474) - 2831994..2832425 (+) 432 WP_182391359.1 type IV pilin protein -
  HBNCFIEN_RS12240 (HBNCFIEN_02475) comEC 2832558..2834771 (+) 2214 WP_182391360.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  HBNCFIEN_RS12245 (HBNCFIEN_02476) - 2835030..2836079 (+) 1050 WP_182391361.1 bifunctional transcriptional activator/DNA repair enzyme AdaA -
  HBNCFIEN_RS12250 (HBNCFIEN_02477) - 2836353..2836610 (-) 258 WP_182391362.1 hypothetical protein -
  HBNCFIEN_RS12255 (HBNCFIEN_02478) - 2836772..2837587 (-) 816 WP_182391363.1 mechanosensitive ion channel family protein -
  HBNCFIEN_RS12260 (HBNCFIEN_02479) - 2837756..2838079 (-) 324 WP_182391364.1 hypothetical protein -
  HBNCFIEN_RS12265 (HBNCFIEN_02480) - 2838236..2838691 (+) 456 WP_182391365.1 Rrf2 family transcriptional regulator -
  HBNCFIEN_RS12270 (HBNCFIEN_02481) - 2838681..2839076 (+) 396 WP_255464211.1 DUF488 domain-containing protein -
  HBNCFIEN_RS12275 (HBNCFIEN_02482) - 2839120..2839512 (+) 393 WP_182391366.1 group III truncated hemoglobin -
  HBNCFIEN_RS12280 (HBNCFIEN_02483) cydP 2839505..2839678 (+) 174 WP_182391367.1 cytochrome oxidase putative small subunit CydP -

Sequence

Protein


Download         Length: 737 a.a.        Molecular weight: 83977.44 Da        Isoelectric Point: 9.1784

>NTDB_id=470917 HBNCFIEN_RS12240 WP_182391360.1 2832558..2834771(+) (comEC) [Legionella sp. PC997]
MEIFCFFTGILYLYTLNRTLPLISLLFLFLSPKYSLILFFILGVLVACLHQLLNVPRGMPNSPVIPKVIIQGRIASIPNQ
DFSKTQFLFALEEYDQHPAQGLIQLAWYNNAPEIHVGQRWQFTAKLKKPRNYFNPGSADYVGTLNTRHIHWTGYILSKNN
HLLSESPSHFNWLQVREHLGNKLNQLAPNQFTAGVFEALTLNLTNHISPQNWDLFRRTGTTHLFGISGEHIALISGMIYW
LIRWLWSQSAFCCLYIPAPYIASVSGLLAALLYAFLAGFAPPVQRALIGCFFYTFYRLGKQRFSAWQIWRYALFGVLCIE
PHAVFMQGFYFSFLAVACLLLTQQRWKLKGYKGSLALQLSCLIGLMPLTLYWYSYGSINGFIANLFAIPLVSFLIVPIAL
ITMALSSWNVAVLLMKPLSFLIALLFNGLSLIEHLEVVNINYSVHSIEWVVLLMGALLMWILLPIKRLQWIALLWVMLPF
YPFRTVLSPGEAVIDILDVGQGLAVAIRSQHHVLIYDTGDRFFQGNDLGNMVILPYLKTLGIKKIDAVVISHPDKDHRGG
LKSLEKGMHIEQLLVNEPRYYGHGESCHDYPRWTWDGIHFIFFPITHHFKNKNNNSCILQVSTKAGKILLTGDIEKEAED
YLIKTYQEQLASDVLIVPHHGSKTSSSYRFLLEVTPRYAIASLGFDNRFHFPHAKTLATMDSLKIPFYRTDQCGMTRVNL
PSQGKIEKPVCFSSNSL

Nucleotide


Download         Length: 2214 bp        

>NTDB_id=470917 HBNCFIEN_RS12240 WP_182391360.1 2832558..2834771(+) (comEC) [Legionella sp. PC997]
ATGGAAATTTTTTGCTTTTTCACAGGCATACTTTACCTGTATACGCTCAATCGTACTTTGCCTCTAATTAGCCTACTCTT
TTTGTTCCTCAGTCCAAAGTATTCCTTGATTCTCTTTTTTATTCTAGGGGTGTTAGTCGCATGCCTGCATCAATTGCTTA
ATGTACCCAGAGGGATGCCCAATAGTCCAGTCATACCTAAAGTAATAATTCAAGGAAGAATTGCATCTATTCCTAACCAA
GATTTCTCTAAAACACAATTTCTATTTGCACTTGAGGAATATGATCAGCATCCAGCTCAAGGATTAATTCAATTGGCCTG
GTATAACAATGCTCCTGAAATACACGTAGGGCAACGATGGCAGTTTACCGCCAAGTTAAAAAAACCACGAAATTATTTTA
ACCCAGGAAGCGCCGATTATGTCGGCACACTAAATACAAGGCATATTCATTGGACGGGCTATATTCTTTCTAAAAACAAT
CATTTACTCTCAGAATCTCCTTCTCATTTTAATTGGCTTCAAGTACGTGAACATCTAGGCAATAAACTCAACCAATTGGC
ACCGAATCAATTTACTGCAGGAGTTTTTGAAGCATTAACTTTAAATTTGACCAACCATATTAGCCCGCAAAATTGGGATC
TATTTAGACGTACAGGAACCACCCATTTATTCGGAATTTCAGGAGAACATATTGCATTAATATCTGGAATGATTTATTGG
CTGATTCGATGGCTATGGTCTCAAAGCGCCTTCTGCTGTTTGTATATTCCAGCCCCCTATATTGCTAGTGTTAGCGGGCT
CCTGGCGGCTTTATTATATGCTTTCTTAGCAGGATTTGCCCCACCAGTACAAAGAGCACTCATCGGCTGTTTTTTTTATA
CCTTCTATCGTCTAGGAAAACAGCGCTTTTCAGCCTGGCAAATATGGAGATATGCTCTCTTTGGTGTTTTATGTATCGAA
CCACACGCAGTATTCATGCAAGGTTTTTATTTTTCTTTTTTGGCTGTCGCGTGTTTGCTTTTAACTCAACAACGTTGGAA
GTTAAAAGGATATAAAGGAAGTTTAGCCTTACAATTAAGCTGCTTAATTGGACTCATGCCGTTAACCCTATACTGGTATT
CGTATGGTTCCATTAATGGTTTTATTGCGAATTTATTTGCTATTCCTCTAGTTAGCTTTTTAATCGTACCCATAGCATTA
ATAACGATGGCACTCAGTTCATGGAATGTTGCCGTCCTCTTAATGAAGCCCTTATCATTTCTGATTGCACTGTTATTCAA
CGGATTAAGCCTTATCGAACATTTAGAAGTTGTTAATATTAATTATTCGGTCCATAGCATTGAATGGGTGGTTCTCTTGA
TGGGCGCTTTACTGATGTGGATTTTATTACCTATTAAACGCCTACAATGGATTGCATTACTCTGGGTAATGCTTCCATTT
TACCCATTCCGCACTGTATTATCTCCAGGAGAAGCAGTAATTGATATTTTGGATGTAGGCCAAGGTTTGGCCGTTGCGAT
AAGAAGCCAACATCATGTGTTGATCTATGATACTGGAGATCGGTTTTTTCAAGGAAATGACCTAGGGAATATGGTGATTT
TACCTTACCTTAAAACCTTAGGGATAAAAAAAATTGATGCCGTGGTCATTAGTCATCCAGATAAAGATCACCGTGGAGGA
CTCAAATCTCTTGAAAAAGGAATGCACATAGAGCAACTATTGGTCAATGAACCTCGTTATTACGGTCATGGTGAATCATG
CCATGATTATCCACGGTGGACGTGGGATGGTATTCATTTTATTTTTTTTCCAATCACCCATCATTTTAAGAATAAAAACA
ATAATTCATGTATCTTGCAAGTAAGCACTAAAGCGGGAAAGATATTGTTAACCGGTGATATTGAAAAAGAAGCCGAAGAT
TATTTAATAAAAACATATCAAGAACAACTGGCTTCTGATGTGTTAATTGTTCCTCATCACGGTAGTAAAACCTCGTCTTC
TTATCGATTCTTGCTCGAAGTTACCCCCCGCTATGCTATAGCCTCATTAGGTTTTGATAATCGTTTTCACTTTCCTCATG
CTAAAACTTTGGCCACTATGGACTCATTAAAAATTCCTTTTTATAGAACAGATCAGTGCGGTATGACCCGAGTAAATTTA
CCATCTCAGGGAAAAATAGAAAAACCTGTGTGTTTTAGCAGCAATAGTTTGTAG

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(26-157)

Metallo-beta-lactamase superfamily (Lactamase_B)

(498-683)

Competence protein (Competence)

(199-466)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G4RIQ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Legionella pneumophila strain Lp02

62.262

99.593

0.62
  comEC Legionella pneumophila strain ERS1305867

62.177

99.729

0.62