Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   HBNCFIEN_RS10665 Genome accession   NZ_CP059576
Coordinates   2475370..2475699 (-) Length   109 a.a.
NCBI ID   WP_182391070.1    Uniprot ID   A0A7G4RHU4
Organism   Legionella sp. PC997     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2470370..2480699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBNCFIEN_RS10650 (HBNCFIEN_02151) mreC 2470724..2471629 (-) 906 WP_182391068.1 rod shape-determining protein MreC -
  HBNCFIEN_RS10655 (HBNCFIEN_02152) - 2471607..2472644 (-) 1038 WP_003636696.1 rod shape-determining protein -
  HBNCFIEN_RS10660 (HBNCFIEN_02153) - 2473048..2475285 (+) 2238 WP_182391069.1 hypothetical protein -
  HBNCFIEN_RS10665 (HBNCFIEN_02154) comEA 2475370..2475699 (-) 330 WP_182391070.1 helix-hairpin-helix domain-containing protein Machinery gene
  HBNCFIEN_RS10670 (HBNCFIEN_02155) - 2476016..2477419 (-) 1404 WP_182391071.1 M20 family metallopeptidase -
  HBNCFIEN_RS10675 (HBNCFIEN_02156) - 2477394..2478485 (-) 1092 WP_182391072.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  HBNCFIEN_RS10680 (HBNCFIEN_02157) nadC 2478482..2479324 (-) 843 WP_182391073.1 carboxylating nicotinate-nucleotide diphosphorylase -

Sequence

Protein


Download         Length: 109 a.a.        Molecular weight: 11963.20 Da        Isoelectric Point: 10.6465

>NTDB_id=470916 HBNCFIEN_RS10665 WP_182391070.1 2475370..2475699(-) (comEA) [Legionella sp. PC997]
MKAKFIATVLSLSVVTCSAHAVITKEISVKKKPPVVIHKIDLNTADLSMLTGSVKGIGKKRAEAIIAYRKSHHGFKSLEE
LADVKGLGQHFVTLNRDKLNQVFVINKIE

Nucleotide


Download         Length: 330 bp        

>NTDB_id=470916 HBNCFIEN_RS10665 WP_182391070.1 2475370..2475699(-) (comEA) [Legionella sp. PC997]
ATGAAAGCAAAATTTATTGCTACTGTTTTGTCATTATCTGTAGTTACTTGCTCTGCTCATGCAGTTATCACTAAAGAAAT
CTCAGTCAAAAAAAAACCCCCTGTAGTAATTCATAAAATTGATCTCAACACAGCTGATTTATCAATGCTTACCGGTTCAG
TTAAAGGCATAGGAAAAAAGCGAGCTGAAGCGATTATCGCATATCGTAAAAGTCATCATGGTTTTAAGTCTTTGGAAGAG
CTGGCTGATGTGAAGGGCTTAGGCCAACATTTTGTGACATTGAATCGTGATAAATTAAATCAAGTGTTTGTTATTAATAA
AATAGAATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(37-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G4RHU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

59.633

100

0.596
  comEA Legionella pneumophila strain ERS1305867

59.633

100

0.596