Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   H3L91_RS11935 Genome accession   NZ_CP059571
Coordinates   2449545..2451584 (+) Length   679 a.a.
NCBI ID   WP_007341244.1    Uniprot ID   F2B920
Organism   Neisseria bacilliformis strain DSM 23338     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2444545..2456584
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L91_RS11910 (H3L91_11910) - 2444622..2445596 (+) 975 WP_050783147.1 L,D-transpeptidase -
  H3L91_RS11915 (H3L91_11915) - 2445940..2446350 (+) 411 WP_007341238.1 DUF2846 domain-containing protein -
  H3L91_RS11920 (H3L91_11920) - 2446431..2446700 (+) 270 WP_040658434.1 hypothetical protein -
  H3L91_RS11925 (H3L91_11925) - 2446836..2447102 (-) 267 WP_003796988.1 SemiSWEET family transporter -
  H3L91_RS11930 (H3L91_11930) tldD 2447633..2449123 (-) 1491 WP_007341242.1 metalloprotease TldD -
  H3L91_RS11935 (H3L91_11935) recG 2449545..2451584 (+) 2040 WP_007341244.1 ATP-dependent DNA helicase RecG Machinery gene
  H3L91_RS11940 (H3L91_11940) - 2451635..2452564 (+) 930 WP_306420082.1 SprT family zinc-dependent metalloprotease -
  H3L91_RS11945 (H3L91_11945) - 2452712..2453515 (-) 804 WP_154647160.1 hypothetical protein -
  H3L91_RS11950 (H3L91_11950) - 2453555..2454280 (-) 726 WP_007341247.1 amino acid ABC transporter ATP-binding protein -
  H3L91_RS11955 (H3L91_11955) rsmA 2454307..2455086 (-) 780 WP_040659233.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  H3L91_RS12520 - 2455227..2455358 (+) 132 WP_007341250.1 hypothetical protein -
  H3L91_RS11960 (H3L91_11960) - 2455363..2455677 (+) 315 WP_007341251.1 hypothetical protein -
  H3L91_RS11965 (H3L91_11965) - 2455750..2455962 (-) 213 WP_040658436.1 glycine zipper 2TM domain-containing protein -
  H3L91_RS11970 (H3L91_11970) - 2456075..2456524 (+) 450 WP_007341253.1 hypothetical protein -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 74971.99 Da        Isoelectric Point: 7.6931

>NTDB_id=470880 H3L91_RS11935 WP_007341244.1 2449545..2451584(+) (recG) [Neisseria bacilliformis strain DSM 23338]
MTPETRKQLKITDTAAKKLEKLHLHTAWDLVLHLPLRYEDETHIMPLQDAPVGVPCQVEGTVLHQEVMFKPRKQLIVQIG
DNAGNVLFLRFIHFYPSQQKQLAVGKRIRAVGEIKHGFYGDEMIHPKIRDAETGGLAESLTPVYPTVNGLNQPTLRRIIQ
TALDDTPLHDTLPDALLGRLKLPHLAESLRLLHAPPPSLSVQQLSDGALPAWQRLKFDELLAQQLSMRLARQKRISGQAA
PLTGNGTLSQPLLNALPFALTCAQEKALAEIRQDMAQTFPMHRLLQGDVGSGKTIVAALSALAAIEAGAQVAVMAPTEIL
AEQHFIKFKQWFDPLGLDIAWLSGSQRKKAKDEAKAQLSDGLVKIAVGTHALFQDDVAFQNLGLVIVDEQHRFGVAQRLA
LKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSLIDELPPGRTPIQTRLVNSLRRAEVEGYLLGICRKGQQAYWVCPLIE
ESETLQLQTATETLEQLQTALPELNIGLVHGRMKATEKATVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMG
LAQLHQLRGRVGRGAAKSVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEQD
LHLLERARDIAPQLIEQNPDIVKAHLDRWLASRAAYMGA

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=470880 H3L91_RS11935 WP_007341244.1 2449545..2451584(+) (recG) [Neisseria bacilliformis strain DSM 23338]
ATGACTCCCGAAACCCGAAAACAGCTCAAAATCACCGACACCGCCGCCAAAAAGTTGGAAAAGCTCCATCTGCACACCGC
TTGGGATTTGGTGCTGCACCTGCCGCTGCGCTACGAAGACGAAACCCACATCATGCCGCTGCAAGACGCGCCCGTCGGCG
TGCCCTGTCAGGTGGAAGGCACGGTGCTGCATCAGGAAGTCATGTTCAAACCGCGCAAACAACTGATTGTGCAAATCGGC
GACAACGCGGGCAACGTGTTGTTTTTGCGCTTTATTCATTTTTACCCGAGTCAGCAGAAGCAGCTGGCCGTCGGTAAACG
CATTCGCGCCGTGGGCGAAATCAAACACGGTTTTTACGGCGACGAGATGATTCATCCCAAAATACGCGATGCCGAAACCG
GCGGCCTTGCCGAGAGCCTCACGCCGGTTTATCCCACCGTAAACGGGCTGAACCAGCCCACCCTACGCCGCATCATCCAG
ACGGCCTTAGACGACACTCCGCTGCACGACACACTGCCCGACGCGCTGTTAGGCCGTCTGAAACTGCCGCATCTGGCCGA
AAGCCTGCGCCTTTTGCACGCTCCGCCGCCGAGCCTGAGCGTGCAACAGTTGTCCGACGGCGCACTGCCCGCATGGCAGC
GGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCCATGCGGCTGGCGCGGCAGAAACGCATCAGCGGGCAGGCCGCG
CCGCTGACCGGCAACGGCACGCTGTCGCAGCCCCTGTTAAACGCGCTGCCCTTCGCCCTTACCTGCGCCCAAGAAAAAGC
CCTTGCCGAAATCCGGCAGGACATGGCGCAAACCTTTCCCATGCACCGCCTGTTGCAGGGCGATGTCGGCAGCGGCAAAA
CCATCGTTGCCGCGCTCTCCGCGCTTGCCGCCATCGAAGCCGGCGCACAAGTGGCCGTGATGGCCCCCACCGAAATCCTC
GCCGAACAGCACTTTATCAAGTTCAAACAATGGTTTGATCCGCTCGGTCTCGACATCGCATGGCTCTCGGGCAGCCAGCG
CAAAAAAGCCAAAGACGAAGCCAAAGCGCAGCTTTCAGACGGCCTGGTCAAAATCGCCGTCGGCACGCACGCCCTGTTTC
AAGACGACGTGGCCTTTCAAAACCTCGGCCTCGTGATTGTGGACGAACAGCACCGCTTCGGCGTGGCGCAGCGTCTCGCC
CTCAAAAACAAAGGCCGCGACGTACACCAGCTGATGATGTCCGCCACCCCCATCCCGCGTACCCTCGCCATGAGCTTTTT
CGCCGACCTCGATGTGTCCTTGATCGACGAACTCCCGCCCGGCCGCACGCCCATCCAAACCCGCCTCGTCAACAGCCTGC
GCCGCGCCGAAGTCGAAGGCTACCTGCTGGGTATCTGCCGCAAAGGGCAGCAGGCATACTGGGTCTGCCCCCTGATTGAA
GAGAGCGAAACCCTCCAGCTGCAAACCGCCACCGAAACTCTGGAGCAGCTTCAGACGGCCTTGCCCGAACTCAACATCGG
CCTTGTACACGGCCGCATGAAAGCCACCGAAAAAGCCACCGTGATGGCCGAATTTGCCGCAGGCCGTCTGAATGTGTTGG
TGGCCACTACCGTGATCGAAGTCGGCGTAGACGTACCCAACGCCGCTCTGATGGTGATCGAACACGCCGAACGCATGGGC
TTGGCGCAGCTTCACCAACTGCGCGGACGCGTCGGGCGCGGCGCGGCCAAAAGCGTGTGCGTCCTTTTGTTTGCCGAACC
CTTGAGCGAACTGGCCAAAGCGCGGCTGAAAGTGATTTACGAGCACACCGACGGCTTTGAAATCGCCCGCCAAGACCTCA
ACATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTCCCCATGCTGCGCTTCGCCAACTTGGAACAGGAT
TTGCACCTGTTGGAACGCGCCCGCGACATCGCCCCGCAGTTAATCGAACAGAATCCCGACATCGTCAAAGCCCATTTAGA
CAGATGGCTCGCCAGCCGCGCCGCCTACATGGGCGCGTAA

Domains

Predicted by InterproScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)

RecG wedge domain (RecG_wedge)

(12-162)

Helicase conserved C-terminal domain (Helicase_C)

(467-574)

DEAD/DEAH box helicase (DEAD)

(282-418)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2B920

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.988

99.853

0.859