Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H3L91_RS09410 Genome accession   NZ_CP059571
Coordinates   1939823..1940302 (+) Length   159 a.a.
NCBI ID   WP_007343563.1    Uniprot ID   F2BFQ1
Organism   Neisseria bacilliformis strain DSM 23338     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1934823..1945302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L91_RS09380 (H3L91_09380) - 1934847..1935248 (-) 402 WP_040659089.1 hypothetical protein -
  H3L91_RS09385 (H3L91_09385) - 1935364..1936230 (+) 867 WP_007343555.1 ATP-binding protein -
  H3L91_RS09390 (H3L91_09390) - 1937052..1937522 (+) 471 WP_244958495.1 cytochrome b -
  H3L91_RS09395 (H3L91_09395) - 1937659..1938111 (+) 453 WP_040659641.1 S-ribosylhomocysteine lyase -
  H3L91_RS09400 (H3L91_09400) - 1938108..1938812 (+) 705 WP_007343560.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  H3L91_RS09405 (H3L91_09405) - 1938893..1939609 (+) 717 WP_007343561.1 phosphoglycolate phosphatase -
  H3L91_RS09410 (H3L91_09410) recX 1939823..1940302 (+) 480 WP_007343563.1 recombination regulator RecX Regulator
  H3L91_RS09415 (H3L91_09415) - 1940365..1941186 (+) 822 WP_007343564.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  H3L91_RS09420 (H3L91_09420) - 1941597..1942919 (-) 1323 WP_007343565.1 MFS transporter -
  H3L91_RS09425 (H3L91_09425) - 1943244..1944209 (-) 966 WP_007343567.1 stomatin-like protein -
  H3L91_RS09430 (H3L91_09430) - 1944219..1944623 (-) 405 WP_040659092.1 NfeD family protein -
  H3L91_RS12515 - 1944710..1944838 (-) 129 WP_256998607.1 hypothetical protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 17850.01 Da        Isoelectric Point: 9.5879

>NTDB_id=470873 H3L91_RS09410 WP_007343563.1 1939823..1940302(+) (recX) [Neisseria bacilliformis strain DSM 23338]
MTQQKSLRARALDILARSETGRAALKRKLAPHAASEDELEAVLDEMAARGWQSDTRYAEAYIHSKGRKHGSLRLRHDLAR
QGVDEETVRALLPDADTELAAAVSVVRKKFKTPPADYAAAQKQMRFLAYRGFDGDTVRRALKQAWTDGYTEYDGTDDRT

Nucleotide


Download         Length: 480 bp        

>NTDB_id=470873 H3L91_RS09410 WP_007343563.1 1939823..1940302(+) (recX) [Neisseria bacilliformis strain DSM 23338]
ATGACCCAGCAAAAATCCCTCCGCGCCCGCGCCCTCGACATCCTCGCCCGCAGCGAAACCGGCCGCGCCGCCCTCAAACG
CAAACTCGCCCCCCACGCCGCCAGCGAAGACGAACTCGAAGCCGTGCTCGACGAAATGGCCGCGCGCGGCTGGCAGTCCG
ACACCCGCTACGCCGAAGCCTACATCCACAGCAAAGGCCGCAAACACGGCAGCCTGCGCCTGCGCCACGACCTCGCACGG
CAGGGCGTGGACGAAGAAACCGTCCGCGCCCTACTGCCCGACGCCGACACCGAACTGGCCGCCGCCGTGTCCGTCGTGCG
CAAAAAATTCAAAACCCCACCCGCCGACTACGCCGCCGCACAAAAACAAATGCGCTTTCTCGCCTATCGCGGCTTCGACG
GCGACACCGTCCGCCGCGCCCTCAAACAAGCCTGGACAGACGGATACACCGAATACGACGGCACAGACGACCGGACATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2BFQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

65.772

93.711

0.616