Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H3L92_RS06370 Genome accession   NZ_CP059570
Coordinates   1347913..1348371 (+) Length   152 a.a.
NCBI ID   WP_085365964.1    Uniprot ID   A0A1X3D9U8
Organism   Neisseria dentiae strain DSM 19151     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1342913..1353371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L92_RS06345 (H3L92_06345) - 1343134..1343376 (-) 243 WP_143824337.1 hypothetical protein -
  H3L92_RS06350 (H3L92_06350) coaBC 1343585..1344766 (-) 1182 WP_085365960.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  H3L92_RS06355 (H3L92_06355) rph 1344831..1345577 (-) 747 WP_085365961.1 ribonuclease PH -
  H3L92_RS06360 (H3L92_06360) - 1345679..1346551 (+) 873 WP_085365962.1 YicC/YloC family endoribonuclease -
  H3L92_RS06365 (H3L92_06365) - 1346964..1347674 (+) 711 WP_085365963.1 phosphoglycolate phosphatase -
  H3L92_RS06370 (H3L92_06370) recX 1347913..1348371 (+) 459 WP_085365964.1 recombination regulator RecX Regulator
  H3L92_RS06375 (H3L92_06375) - 1348657..1348932 (-) 276 WP_085365965.1 helix-turn-helix domain-containing protein -
  H3L92_RS06380 (H3L92_06380) - 1349115..1349387 (-) 273 WP_085365966.1 chaperone modulator CbpM -
  H3L92_RS06385 (H3L92_06385) - 1349391..1350386 (-) 996 WP_085365967.1 DnaJ C-terminal domain-containing protein -
  H3L92_RS06390 (H3L92_06390) panC 1350778..1351614 (-) 837 WP_085365968.1 pantoate--beta-alanine ligase -
  H3L92_RS06395 (H3L92_06395) panB 1351675..1352460 (-) 786 WP_085365969.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17715.93 Da        Isoelectric Point: 10.0574

>NTDB_id=470828 H3L92_RS06370 WP_085365964.1 1347913..1348371(+) (recX) [Neisseria dentiae strain DSM 19151]
MKPQKSLRARALDILSRRETSRAELKRKLAPHAESEEELEQLLNELAERRWQSDERFAETYVHSKSRQHGRLRLQQALQA
KGVSENTARGFLPDRDSELQTAVAVLRKKFKAPAADLKEKQKQARFLAYRGFDTDIIQTALKNGWNDDEEWE

Nucleotide


Download         Length: 459 bp        

>NTDB_id=470828 H3L92_RS06370 WP_085365964.1 1347913..1348371(+) (recX) [Neisseria dentiae strain DSM 19151]
ATGAAACCGCAAAAATCCCTGCGCGCCCGCGCCCTCGACATTCTTTCCCGCCGGGAAACCAGCCGCGCCGAACTCAAACG
CAAGCTCGCCCCGCACGCCGAAAGCGAAGAAGAACTCGAGCAGCTTTTAAACGAGCTGGCCGAACGCCGTTGGCAGTCCG
ACGAGCGTTTCGCCGAAACCTACGTGCACAGCAAAAGCCGCCAACACGGCCGCCTGCGCCTGCAACAGGCCTTGCAGGCC
AAAGGCGTGAGCGAAAACACCGCCCGCGGTTTCCTGCCCGACCGCGACAGCGAACTGCAAACCGCCGTGGCCGTGCTGCG
CAAAAAGTTCAAAGCCCCCGCCGCCGATTTGAAAGAAAAACAAAAACAGGCGCGCTTTCTCGCCTATCGCGGTTTCGATA
CGGACATCATTCAAACCGCTTTGAAAAACGGCTGGAACGATGACGAAGAATGGGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X3D9U8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

73.684

100

0.737